Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hepatospora_20eriocheir_20[genbank_20GCA_5F002087875.1_202017-04-12] 2,344 sequences; 4,834,792 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq1858 199 3e-46 >seq1858 Length=2805 Score = 199 bits (220), Expect = 3e-46 Identities = 351/504 (70%), Gaps = 23/504 (5%) Strand=Plus/Minus Query 12802 TTAAAAATCAATATCTAGAGAAAATACATCATCGTCCTTATTTGACAT--AACAGACATT 12859 ||||||||| ||| |||| ||| ||||| || ||| | || |||| | | Sbjct 1648 TTAAAAATCTTCATCAAGAGTAAAGTTATCATTGT-----TTTCATATCCAACAAAACTC 1594 Query 12860 TTTTGATA-TTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATT 12918 |||||||| || ||| || |||| ||||| || || ||||| |||| || ||||| || Sbjct 1593 TTTTGATAATTAGCTT-CTTTTTTCTCAAAGAAATTAGTTTTACCTTGCAATGAAATGTT 1535 Query 12919 TTCCATAAAATCGAAAGGATTTTTCGAACAATAGTATTTTTTACAC---CCTAATTCTAG 12975 |||||||||| ||| || ||| | | | ||| ||||| || |||||||| Sbjct 1534 GTCCATAAAATGGAATGGGTTT---GGAGTGTTGTAAATTTTAGACTCACCTAATTCATA 1478 Query 12976 TAACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTAT 13035 | ||||| ||||||| ||| || ||||||| ||||| | | ||||| || || Sbjct 1477 AAGTAATCTATCAGCAATAAATTCAATGTACTCACTCATTTGTTTAGCATTCATCCCAAT 1418 Query 13036 TAATTTTACAGGCATAGCTTCTGTTAAAAAGtttttttCTATATCAACTGCTTCGATAAC 13095 |||||||||||| | ||| || | ||||| | ||||||||| ||||||||||| || Sbjct 1417 TAATTTTACAGGTAAAGCCTCAGCAAAAAATTCTTTTTCTATTTCAACTGCTTCACGGAC 1358 Query 13096 TATGTCTCTTAT-TACGTTCTCTAATGGAGGATTTGATAGATGCTTAAACATCATACATG 13154 || ||| | || |||| | | | | ||| | | | | | | || ||| | Sbjct 1357 AATATCTTTAATGTACGGTGATTTCT-----CTCTGAAATACTCGTGA--AGCAAACAAG 1305 Query 13155 CAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCCG 13214 |||||||| ||||| |||||||| || || || || || |||||||| ||| | | Sbjct 1304 CAAAATCAGTATGCAAACCTTCATCCCTTGAAATAAGTTCATTAGAAAATGTAAGAGCAG 1245 Query 13215 GCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATTC 13274 | | || |||| |||||| | ||||||||| |||||||| || || ||||| ||||| | Sbjct 1244 GAAGAATACCTCTTTTTTTCAACCAAAATATTGCAGCAAAAGATCCTGAAAAGAATATAC 1185 Query 13275 CTTCAACTGCTGCAAACGCTATCA 13298 ||||||| ||||| || |||| Sbjct 1184 CTTCAACACAAGCAAATGCAATCA 1161 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430970087910288