Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hepatospora_20eriocheir_20[genbank_20GCA_5F002087875.1_202017-04-12] 2,344 sequences; 4,834,792 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq1869 179 9e-40 seq1858 111 4e-19 >seq1869 Length=2780 Score = 179 bits (198), Expect = 9e-40 Identities = 180/231 (78%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 104333 CCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGAT 104392 || ||||| || || | || ||||| || ||| ||| ||||| || || || ||| Sbjct 1263 CCACCTCTAAGTCTTAAAACAAGATGCAAAGTACTTTCCTTCTGTATGTTGTAATCACTC 1322 Query 104393 AGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGT 104452 |||||||| || ||||||||||||||||| ||||| || || |||||||| || ||||| Sbjct 1323 AGAGTTCTTCCATCTTCTAGTTGTTTTCCCGCAAATATAAGTCTCTGTTGGTCTGGAGGA 1382 Query 104453 ATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATC-GCTAGGTTCTAC 104511 || |||||||| || ||||| || ||||| ||| | || | ||||| ||| || |||| Sbjct 1383 ATACCTTCTTTGTCTTGAATTTTCGCTTTAACAGTCTCAATAGTATCTGCT-GGATCTAA 1441 Query 104512 CTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTT 104562 |||| |||||| || || || |||||||| |||||||| ||||||||||| Sbjct 1442 TTCTAATGTAATTGTTTTTCCTGTAAGTGTCTTTACAAAAATCTGCATTTT 1492 >seq1858 Length=2805 Score = 111 bits (122), Expect = 4e-19 Identities = 280/420 (67%), Gaps = 13/420 (3%) Strand=Plus/Plus Query 269139 TTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGGT 269198 |||| ||||| ||| ||||||||||||||||| || |||||||| || || ||||||| Sbjct 1164 TTGCATTTGCTTGTGTTGAAGGTATATTCTTTTCAGGATCTTTTGCTGCAATATTTTGGT 1223 Query 269199 TGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGACG 269258 |||| |||||||| || | || | | || || ||||| ||| | || ||||| | Sbjct 1224 TGAAAAAAAGAGGTATTCTTCCTGCTCTTACATTTTCTAATGAACTTATTTCAAGGGATG 1283 Query 269259 AAGGTTTACACTGCGACTTCGCTTGTTTATTATTTACTAATTATCTTTCACACAAACCTT 269318 ||||||| || || || ||||||| | || || | | ||||| | | | Sbjct 1284 AAGGTTTGCATACTGATTTTGCTTGTT--TGCTTCACGA---GTATTTCAGAGAGA---A 1335 Query 269319 CTCAAGATAGAGTATACGAAATTATAGATTCAGCTGTTTCTGTAGAAACAGAATTTCTAA 269378 ||| || | || | || ||| | | ||| ||| |||||| ||||||| | Sbjct 1336 ATCACCGTACATTA-AAGATATTGTCCGTGAAGCAGTTGAAATAGAAAAAGAATTTTTTG 1394 Query 269379 CGGAAGCTCTATCTATCGATCTTATCGGTATGAATAGCAAATCGATGATAGAATATATTA 269438 | || ||| || || | | | || || |||||| ||| |||| || || ||| Sbjct 1395 CTGAGGCTTTACCTGTAAAATTAATTGGGATGAATGCTAAACAAATGAGTGAGTACATTG 1454 Query 269439 AGTTCGTATCTGATAGATTGCTGGTGTCTTTAGGGTTTAG--TAAAAAATATAACGTTGA 269496 | || | |||||||||| || ||||| | || ||||| || ||| | Sbjct 1455 AATTTATTGCTGATAGATTACTTTATGAATTAGG--TGAGTCTAAAATTTACAACACTCC 1512 Query 269497 AAATCCGTTTAGTTTTATGGAGAATATATCATTAGAAGGTAAGGCTAATTTCTTCGAGAA 269556 ||| || || ||||||||| || || ||||| ||||||| |||||||||| ||||| Sbjct 1513 AAACCCATTCCATTTTATGGACAACATTTCATTGCAAGGTAAAACTAATTTCTTTGAGAA 1572 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151363820627552