Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hepatospora_20eriocheir_20[genbank_20GCA_5F002087875.1_202017-04-12] 2,344 sequences; 4,834,792 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq342 187 3e-42 seq1405 100 3e-16 >seq342 Length=14347 Score = 187 bits (206), Expect = 3e-42 Identities = 305/429 (71%), Gaps = 14/429 (3%) Strand=Plus/Minus Query 164512 CATATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATTAATGGCTCGA 164571 ||| | || |||||| | || |||| || ||||| ||||| |||||||| ||| || Sbjct 9385 CATGTCAAGGGAATTATGCTATATGGTCCACCTGGAACTGGTAAGACATTAATTGCTAGA 9326 Query 164572 TGCATTGC-TCAAGCTTTTAAAT-CGCGACCCGTTAAAATTGTTAATGGTCCTGAATTAT 164629 | | ||| ||| | ||| | || | ||||||||||||||| |||||| | | Sbjct 9325 AAGTTAGGATCA--CTTCTCAATTCAAGAGCGCCTAAAATTGTTAATGGACCTGAAATTT 9268 Query 164630 TGAACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTCAGGAGGCTGAAG 164689 | || || || || ||| | ||||||| ||| | ||||| || ||| |||||||| Sbjct 9267 TAAATAAGTACGTTGGTCAATCAGAAGAAAATATAAGAAATTTATTTGCTGAGGCTGAGA 9208 Query 164690 AAGAACAAAAGAAAGCAGGTTTAGCTAGTA-AATTACATGTTATTGTTTTTGATGAGATA 164748 | || | || || | ||| | | | | |||||||| | ||| |||||||||| ||| Sbjct 9207 ATGAGTATAA-AATGAAGGGTGATCGATCGCAATTACATATAATTATTTTTGATGAAATA 9149 Query 164749 GATGCTCTTTGCAAAAAACGTGGT---GATAATATTA---TTCATGATGCAGTGGTTAAT 164802 |||||| |||| ||||| | || ||| || | || ||| ||| |||||| Sbjct 9148 GATGCTATTTGTAAAAAGAGAGGATCAGATTCTAGTGGAGTTGGGGATAAAGTAGTTAAT 9089 Query 164803 CAGTTGCTTTCTAAAATAGATGGTGTAGA-ATCCTTAAATAATATTTTAATTGTAGGTAT 164861 ||||| | ||||||||||||||| || | ||||| ||||||||| | |||| || Sbjct 9088 CAGTTATTAAGTAAAATAGATGGTGTTGATAGTCTTAA-TAATATTTTGGTGATAGGAAT 9030 Query 164862 GACCAACCGACCTGATTTAATTGATGATGCTTTATTACGACCTGGTCGATTAGAATTGAA 164921 ||| || ||| |||||||||||||||||| ||||| |||| ||| |||| ||| | || Sbjct 9029 GACAAATAGACTTGATTTAATTGATGATGCATTATTGAGACCGGGTAGATTTGAAATTAA 8970 Query 164922 AATAGAAAT 164930 | ||||||| Sbjct 8969 ATTAGAAAT 8961 >seq1405 Length=3791 Score = 100 bits (110), Expect = 3e-16 Identities = 127/175 (73%), Gaps = 0/175 (0%) Strand=Plus/Minus Query 19329 TTAAAATTAAATTAAGATCTTCTAAAATACCTGAAATAGGTGATAAGTTTGCTTCTTTTA 19388 |||| ||||| ||||| || | ||||||||||| |||||||| ||||||||| Sbjct 1744 TTAAGGTTAAAATAAGAAGTTTAAGAATACCTGAAAGGGGTGATAAATTTGCTTCTAGAC 1685 Query 19389 CTGCTCAAAAAGGCACATGTGGTATGATTTATCGTCAAGAAGATATGCCTTTTACTAAAG 19448 |||||| ||||| ||| || || |||| |||||| |||||||| ||||| | Sbjct 1684 ATGCTCAGAAAGGAACAATAGGAATTATTTTAGATCAAGAGGATATGCCATTTACATGTG 1625 Query 19449 ATGGTATAGTGCCGGATCTTATTATTAACCCACATGCTTTTCCAAGTCGAATGAC 19503 | ||||| | || || | |||||||| || |||||| | ||| ||| ||||| Sbjct 1624 AGGGTATCATTCCTGACATAATTATTAATCCTCATGCTATCCCATCTCGTATGAC 1570 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595854540950400