Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hepatospora_20eriocheir_20[genbank_20GCA_5F002087875.1_202017-04-12] 2,344 sequences; 4,834,792 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq1858 188 8e-43 >seq1858 Length=2805 Score = 188 bits (208), Expect = 8e-43 Identities = 309/440 (70%), Gaps = 14/440 (3%) Strand=Plus/Minus Query 21185 TTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATAGAT 21244 |||||||||| | || |||| || || ||||| || || |||| |||||| || Sbjct 1593 TTTTGATAATTAGCTTCTTTTTTCTCAAAGAAATTAGTTTTACCTTGCAATGAAATGTTG 1534 Query 21245 TCCATAAAATCAAATGGATTTTCAGATTTAAATATTTTATTACAACCCAGTTCTGATAAT 21304 |||||||||| ||||| ||| || || | |||||| ||| | ||| | | | Sbjct 1533 TCCATAAAATGGAATGGGTTTGGAGTGTTGTAAATTTTAGACTCACCTAATTCATAAAGT 1474 Query 21305 AATCTATCTGCTACAAATTCTATATATTGACACATTAATTCACAATTCATACCGATCAAT 21364 |||||||| || | |||||| || || | || |||| || | |||||| || || ||| Sbjct 1473 AATCTATCAGCAATAAATTCAATGTACTCACTCATTTGTTTAGCATTCATCCCAATTAAT 1414 Query 21365 TTTACAGGAAGAGCTTTTGTCAAAAAAGATTTTTCTATAGAGACGGCTTCA---ACAATT 21421 |||||||| | ||| | | ||||| ||||||||| || |||||| ||||| Sbjct 1413 TTTACAGGTAAAGCCTCAGCAAAAAATTCTTTTTCTATTTCAACTGCTTCACGGACAAT- 1355 Query 21422 ATATTTATTATCCTA-GATGTACTAGGGGGATACAATAATTGTTTAAACATCAAACATGC 21480 || |||| | | | ||| | || | | ||| | || | |||||| || Sbjct 1354 ATCTTTAATGTACGGTGATTT-CTCTCTGAA----ATACTCGTGAAG----CAAACAAGC 1304 Query 21481 AAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGGG 21540 ||||||| |||||||||||||||||| || | ||||||||||||||| | | | || Sbjct 1303 AAAATCAGTATGCAAACCTTCATCCCTTGAAATAAGTTCATTAGAAAATGTAAGAGCAGG 1244 Query 21541 CATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAAAATGCC 21600 | | ||||| ||||| ||||||||||||| ||||| | |||||||||||| || || Sbjct 1243 AAGAATACCTCTTTTTTTCAACCAAAATATTGCAGCAAAAGATCCTGAAAAGAATATACC 1184 Query 21601 CTCAACGGCAGCAAATGCAA 21620 ||||| ||||||||||| Sbjct 1183 TTCAACACAAGCAAATGCAA 1164 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531885215306560