Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hepatospora_20eriocheir_20[genbank_20GCA_5F002087875.1_202017-04-12] 2,344 sequences; 4,834,792 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq1858 123 6e-23 >seq1858 Length=2805 Score = 123 bits (136), Expect = 6e-23 Identities = 343/520 (66%), Gaps = 31/520 (6%) Strand=Plus/Plus Query 22429 TCAATTAAGAATAAGGCAGATTGGGCGCTGAAATGGATGAAC---AATGAACGTTC--AT 22483 || |||||||| ||||| |||||||| || |||||||| | ||||| ||| || Sbjct 1094 TCTATTAAGAAAAAGGCTGATTGGGCTCTTAAATGGATTCATTCAAATGAGAGTTTTGAT 1153 Query 22484 TCGCGGAACGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTT 22543 | | | | |||||||||||| |||||||| || |||||||| ||| | ||| Sbjct 1154 ACTAGAA-----TGATTGCATTTGCTTGTGTTGAAGGTATATTCTTTTCAGGATCTTTTG 1208 Query 22544 GTGCAATCTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGT 22603 |||||| |||||| | |||||| | | ||| | || | ||| || ||||| ||||| Sbjct 1209 CTGCAATATTTTGGTTGAAAAAAAGAGGTATTCTTCCTGCTCTTACATTTTCTAATGAAC 1268 Query 22604 TAATTAGCCGAGATGAGGGTCTTCATACCGATTTTGCGTGTATGCTATATCGGAATCATA 22663 | ||| | ||||| ||| | ||||| |||||||| ||| |||| || | || Sbjct 1269 TTATTTCAAGGGATGAAGGTTTGCATACTGATTTTGCTTGTTTGCT---TCACGAGTATT 1325 Query 22664 TCATTCATAAACTTCC--ATATGAAACTGTACTTGATATTATTACAAATGCAGTTGAACT 22721 ||| | ||| || | || ||| |||||| | | ||||||||| | Sbjct 1326 TCAGAGAGAAATCACCGTACATTAAA--------GATATTGTCCGTGAAGCAGTTGAAAT 1377 Query 22722 TGAACGTCTATTTATTTGC-GAGGCGTTACCAGTAAGTCTCATTGGTATCAATGCCGAAT 22780 ||| |||| ||||| ||||| ||||| |||| | ||||| || ||||| || Sbjct 1378 AGAAAAAGAATTT-TTTGCTGAGGCTTTACCTGTAAAATTAATTGGGATGAATGCTAAAC 1436 Query 22781 CAATGAGTACATATATTAAATTTGTTGCAGATCGTCTATTAATTT---CACTCGGTTATG 22837 ||||||| || ||| ||||| |||| ||| | |||| ||| | | ||| | Sbjct 1437 AAATGAGTGAGTACATTGAATTTATTGCTGATAG---ATTACTTTATGAATTAGGTGAGT 1493 Query 22838 CAAAGCATTATAACGTCGTTAATCCATTTGAATGGATGGAACTTATTTCACTTGAAGGAA 22897 | || ||| ||| || ||||| | | ||||| |||||| | |||| | Sbjct 1494 CTAAAATTTACAACACTCCAAACCCATTCCATTTTATGGACAACATTTCATTGCAAGGTA 1553 Query 22898 AGACCAATTTCTTCGAAAAAAGAGTTGGTGAATACCAAAA 22937 | || |||||||| || |||| || | | | || ||||| Sbjct 1554 AAACTAATTTCTTTGAGAAAAAAGAAGCTAATTATCAAAA 1593 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303314457033008