Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hepatospora_20eriocheir_20[genbank_20GCA_5F002087875.1_202017-04-12]
2,344 sequences; 4,834,792 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq1858 221 1e-52
>seq1858
Length=2805
Score = 221 bits (244), Expect = 1e-52
Identities = 624/937 (67%), Gaps = 31/937 (3%)
Strand=Plus/Minus
Query 92742 TTAGAAATCTGCATCTAGTGTAAATACATTGTCAAGTGGATTCTTATTCATAACACCACA 92801
||| |||||| |||| || ||||| || ||| || ||| ||| || ||| ||
Sbjct 1648 TTAAAAATCTTCATCAAGAGTAAAG---TTATCAT-TGTTTTCATATCCA--ACAAAACT 1595
Query 92802 TTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTCCAAAGATATCGA 92861
||||| || | | ||||||| ||||||||||| || || |||| ||| || ||
Sbjct 1594 CTTTTGATAATTAGCTTCTTTTTTCTCAAAGAAATTAGTTTTACCTTGCAATGAAATGTT 1535
Query 92862 ATTCACTAGT--GATTGGATTCTTGGCGTTATAATACTTTTCACCGATC-AACTCGTACA 92918
| || | || ||| || | ||| ||| | ||| || | | || || || |
Sbjct 1534 GTCCATAAAATGGAATGGGTTTGGAGTGTTGTAA-ATTTTAGACTCACCTAATTCATAAA 1476
Query 92919 ATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAGAA 92978
|||||||||||| | |||||| ||||||| | ||| | | |||||| || | |
Sbjct 1475 GTAATCTATCAGCAATAAATTCAATGTACTCACTCATTTGTTTAGCATTCATCCCAATTA 1416
Query 92979 GACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTTCTTTCAAGA 93038
|||||||| ||| || | || || ||||| || ||| |||| ||||| | |
Sbjct 1415 ATTTTACAGGTAAAGCCTCAGCAAAAAATTCTTTTTCTATTTCAACTGCTTCACGGACAA 1356
Query 93039 TTTCTATTACTCTACTATTTGGTGGTTTTTGTACGACATAATTGTACATTAAGCACGCAA 93098
| ||| ||| | ||| |||| ||| | | || ||| | || | || || ||||
Sbjct 1355 TATCT-TTAATGTAC-----GGTGATTTCTCTCTGAAATACTCGTGAAGCAAACAAGCAA 1302
Query 93099 AGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTGGTA 93158
| || ||||| |||||||| || | ||| || | ||||| ||||| | | | || |
Sbjct 1301 AATCAGTATGCAAACCTTCATCCCTTGAAATAAGTTCATTAGAAAATGTAAGAGCAGGAA 1242
Query 93159 ACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCTT 93218
| |||| ||| || | ||||||||||| ||||||| || ||||| ||||||||||
Sbjct 1241 GAATACCTCTTTTTTTCAACCAAAATATTGCAGCAAAAGATCCTGAAAAGAATATACCTT 1182
Query 93219 CCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATT-ACTGCTGATCCAT 93277
| || |||||||| | || | ||||| | | | || | || ||||||
Sbjct 1181 CAACACAAGCAAATGCAATCATTCTAGTATCAAAACTCTC--ATTTGAATGA--ATCCAT 1126
Query 93278 TTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGG-TAGTGTTTCGATAGCGTTAAATAG 93336
|| | ||||||||| || |||||||||||| |||| || || ||| ||| |||||||||
Sbjct 1125 TTAAGAGCCCAATCAGCCTTTTTCTTAATAGAAGGATAATG-TTCAATACCGTTAAATA- 1068
Query 93337 GTAATCTCGCTCGTCCGA--ATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCA 93394
||| || ||| ||| ||| || || || || ||| ||| || | |||
Sbjct 1067 -AAATATCCCTCTCACGATCATCCTTGATAAGAGTTTCTATCAACTTAGAGTATGTCTCA 1009
Query 93395 GAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGC 93454
||| ||||| || || | | ||| || | || || | | |||| || ||
Sbjct 1008 TTATGAACATTTTCAATAGAACATTGTAAACTATAAAATGACTTCACTTCTAACATGTGA 949
Query 93455 ACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaa 93514
| ||| | || ||| | |||| | ||||| ||| || |||||||| || ||||||||
Sbjct 948 ATTTCATTAGTAAAACGTTCTAATAAATTTTGATTAACAATACCATCTGAAGCTGCAAAG 889
Query 93515 aaaGCCAATATATGCTTTATAAAATGTTTCTCATCATC-TTTAAGCTTATCCCAATCGGA 93573
||||| | | | || || ||| |||||||| || ||||| || || ||||
Sbjct 888 AAAGCTAGCACAGTTTTAATGAAAAACTTCTCATCCTCGTTTAAAGTT-TCAAAATC-AT 831
Query 93574 TAG-ATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGT 93632
||| |||||| | || || | |||||| |||||||||| || ||| ||||| |
Sbjct 830 TAGCATCTTTAGTAAAGTCAATTTCTTCAACAGTCCAAATGACAGCAGATGCCTTTTTAT 771
Query 93633 ACATATCCCATATGTCTTGATATTGAATTGGAAATAT 93669
|||| |||| || ||| || |||||||||| | |||
Sbjct 770 ACATCCCCCAAATCTCTGGAAATTGAATTGGCAGTAT 734
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556844483978560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |