Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hepatospora_20eriocheir_20[genbank_20GCA_5F002087875.1_202017-04-12] 2,344 sequences; 4,834,792 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq1869 93.3 5e-14 >seq1869 Length=2780 Score = 93.3 bits (102), Expect = 5e-14 Identities = 166/237 (70%), Gaps = 4/237 (2%) Strand=Plus/Plus Query 41977 ATCGACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAAT 42036 ||| ||| ||||| | | || || | |||||| || || ||||| || || ||||||| Sbjct 1258 ATCTACCACCTCTAAGTCTTAAAACAAGATGCAAAGTACTTTCCTTCTGTATGTTGTAAT 1317 Query 42037 CAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGG 42096 || |||||| | | || ||||| || || || || ||||| |||| ||| ||||| | Sbjct 1318 CACTCAGAGTTCTTCCATCTTCTAGTTGTTTTCCCGCAAATATAAGTCTCTGTTGGTCTG 1377 Query 42097 CTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGC-GTCGCCACCGTGTC-GCTCGA 42154 || | | || ||||| ||| |||| | || | | ||| | | || || ||| || Sbjct 1378 GAGGAATACCTTCTTTGTCT-TGAATTTTCGCTTTAACAGTCTCAATAGTATCTGCTGGA 1436 Query 42155 TTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAtttt 42211 | | | || | || || ||||| || || || ||||||||||| || |||||||| Sbjct 1437 T-CTAATTCTAATGTAATTGTTTTTCCTGTAAGTGTCTTTACAAAAATCTGCATTTT 1492 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543196883864960