Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hepatospora_20eriocheir_20[genbank_20GCA_5F002087875.1_202017-04-12] 2,344 sequences; 4,834,792 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq2081 95.1 1e-14 seq672 84.2 3e-11 seq1073 82.4 9e-11 >seq2081 Length=2078 Score = 95.1 bits (104), Expect = 1e-14 Identities = 123/170 (72%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 116443 AGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTT 116502 || ||||| |||| || |||| ||||| | ||||| || ||||| | ||| ||||| Sbjct 415 AGGTTACAAACAGCCGTTTCATTATTATCTGAATACTCAATTATTTCAGCACATAAATTA 474 Query 116503 GAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAG 116562 ||||| ||||| || || | |||||||||||||| | | ||| | |||||| || Sbjct 475 GAACTTTTAATTGTTCCAAGATTCTTTTGATTTGATAATCTATTAGCAGTATCCTTATAA 534 Query 116563 AGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCA 116612 |||||||| || || || ||||| |||| | | | | ||| || |||| Sbjct 535 AGCATATAAGGAGTACCAGTCTCTATTTGTGCCATTATAATTGCTCTCCA 584 >seq672 Length=876 Score = 84.2 bits (92), Expect = 3e-11 Identities = 108/149 (72%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 116443 AGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTT 116502 || ||||| |||| || |||| ||||| | ||||| || ||||| | ||| ||||| Sbjct 503 AGGTTACAAACAGCCGTTTCATTATTATCTGAATACTCAATTATTTCAGCACATAAATTA 444 Query 116503 GAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAG 116562 ||||| ||||| || || | |||||||||||||| | | ||| | |||||| || Sbjct 443 GAACTTTTAATAGTTCCAAGATTCTTTTGATTTGATAATCTATTAGCAGTATCCTTATAA 384 Query 116563 AGCATATATGGCGTCCCCGTCTCCGTTTG 116591 ||||| || || || || || || |||| Sbjct 383 AGCATGTAAGGAGTACCAGTTTCTATTTG 355 >seq1073 Length=674 Score = 82.4 bits (90), Expect = 9e-11 Identities = 120/170 (71%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 116443 AGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTT 116502 || ||||| |||| || |||| ||||| | ||||| || ||||| | ||| ||||| Sbjct 295 AGGTTACAAACAGCCGTTTCATTATTATCTGAATACTCAATTATTTCAGCACATAAATTA 354 Query 116503 GAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAG 116562 ||||| ||||| || || | ||||||||||| || | | || | |||||| || Sbjct 355 GAACTTTTAATTGTTCCAAGATTCTTTTGATTAGATAATCTATTGGCAGTATCCTTATAA 414 Query 116563 AGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCA 116612 ||||| || || || || ||||| |||| | | | | ||| || |||| Sbjct 415 AGCATGTAAGGAGTACCAGTCTCTATTTGTGCCATTATAATTGCTCTCCA 464 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613489224239040