Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hepatospora_20eriocheir_20[genbank_20GCA_5F002087875.1_202017-04-12] 2,344 sequences; 4,834,792 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq1869 102 2e-16 >seq1869 Length=2780 Score = 102 bits (112), Expect = 2e-16 Identities = 163/231 (71%), Gaps = 5/231 (2%) Strand=Plus/Plus Query 199408 TCGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGT 199467 || |||||| | ||||| || | ||| ||||| || | |||||| ||| || ||| Sbjct 1268 TCTAAGTCTTAAAACAAGATGCAAAGTACTTTCCTTCTGTATGTTGTAATCACTCAGAGT 1327 Query 199468 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCC 199527 ||||||||||| || || ||||| || || || || | ||| ||||| ||| ||| || Sbjct 1328 TCTTCCATCTTCTAGTTGTTTTCCCGCAAATATAAGTCTCTGTTGGTCTGGAGGAATACC 1387 Query 199528 TTCTCGCTCCTGAATCTTTTGC-TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCA 199586 |||| || ||||| ||| || || || | || | || |||| || |||| || | Sbjct 1388 TTCTTTGTCTTGAAT-TTTCGCTTTAACAGTCTCAATAGTATCTGCTGGATCTAATTCTA 1446 Query 199587 ACGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTTAG 199637 | || || || || || || || || || |||||||| || |||||||| Sbjct 1447 ATGTAATTGTTTTTCCTGTAAGTGTCTTTACAAAAATCTG---CATTTTAG 1494 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178886194037048