Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hepatospora_20eriocheir_20[genbank_20GCA_5F002087875.1_202017-04-12] 2,344 sequences; 4,834,792 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq1952 163 2e-34 seq265 150 1e-30 seq2324 138 9e-27 seq1405 118 8e-21 seq239 113 3e-19 seq121 107 1e-17 seq2254 105 5e-17 seq1343 96.9 3e-14 >seq1952 Length=9020 Score = 163 bits (180), Expect = 2e-34 Identities = 218/302 (72%), Gaps = 6/302 (2%) Strand=Plus/Plus Query 518025 TATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTC 518084 ||||||||||||| ||||| || ||| ||||| || | | ||||||| || | || Sbjct 3408 TATCAAAATCTTCTCCTCCTAAAAAAGTGTTTCCATTTGTTGATTTTACTTGAAAGATTC 3467 Query 518085 CATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTA 518144 |||||| | ||||| || | |||| ||||| || || | |||| ||| || Sbjct 3468 CATCTTTTATTTCCAAAATAGAAATATCAAATGTTCCTCCTCCTAAATCATAAACTGCTA 3527 Query 518145 CATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTT 518204 || |||| ||| || |||||||| ||||| || ||||| || | ||||||| Sbjct 3528 TATAACCTTCT----CTT--TTCTTATCAAGTCCATAAGCTAAAGCGGCTGTCGTTGGTT 3581 Query 518205 CATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTC 518264 |||||||||||||||||||||| ||| | | | || |||||||| | ||||||| Sbjct 3582 CATTAATAATTCTCAAAACATTCCAACCTGTTAATTGACCAGCATCTTTTATTGCTTGTC 3641 Query 518265 TTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAA 518324 | || | ||| ||||||||||| |||||||||||||| ||| ||| || ||||||| Sbjct 3642 TCTGAGTATCATTAAAATATGCTGGAACAGTAATAACAGCAGATCCTACATCCTTACCAA 3701 Query 518325 TA 518326 || Sbjct 3702 TA 3703 Score = 95.1 bits (104), Expect = 9e-14 Identities = 191/287 (67%), Gaps = 15/287 (5%) Strand=Plus/Plus Query 322085 TCAAAATCTTCTCCTCCCAAATGTGTATTACCACCTACTGCTAATGTTCTAAATACTCCA 322144 ||||||||||||||||| ||| || || ||| | || | | | ||| | |||| Sbjct 3410 TCAAAATCTTCTCCTCCTAAAAAAGTGTTTCCATTTGTTGATTTTACTTGAAAGATTCCA 3469 Query 322145 TTTGAGATATTCATTAACGAAACATCTAAAGTCCCAGCTCCTAAGTCATAAACAATTACG 322204 | | || | || | |||| ||| || || || ||||||| |||||||| || Sbjct 3470 TCTTTTATTTCCAAAATAGAAATATCAAATGTTCCTCCTCCTAAATCATAAACTGCTATA 3529 Query 322205 TTACCACCAGtttttttATTCCATTTTTCACTTCCTAAACCGTATGCAAGAGCTGCTGCA 322264 | ||| | |||| |||| | | || || || | ||| |||| Sbjct 3530 TAACCTTCTCTTTTCTTAT---------------CAAGTCCATAAGCTAAAGCGGCTGTC 3574 Query 322265 GTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGCAATTTTAGCAGAATCAAGAGTT 322324 |||||||||||||| ||| | | ||||| |||| | | || | ||| ||| || Sbjct 3575 GTTGGTTCATTAATAATTCTCAAAACATTCCAACCTGTTAATTGACCAGCATCTTTTATT 3634 Query 322325 GCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGTAATAACTGC 322371 ||||||||||| | ||||||||||||||||| ||||||||||| || Sbjct 3635 GCTTGTCTCTGAGTATCATTAAAATATGCTGGAACAGTAATAACAGC 3681 >seq265 Length=6307 Score = 150 bits (166), Expect = 1e-30 Identities = 251/363 (69%), Gaps = 0/363 (0%) Strand=Plus/Plus Query 635396 AAATTATATAATGCTCACAAGGCAGGAACCAAAGAAGGATATAAATGTACCCTAATTTTG 635455 |||||| | ||||| || | || || || ||| | | | | ||||| | ||||| Sbjct 5220 AAATTAGACGATGCTAACCATGCTGGTACTAAAAATAGTTCAGAGTGTACATTGATTTTA 5279 Query 635456 ACAGAGGGAGATTCAGCTAAAACATTCGCTATGTCTGGTCTTAATGTTATTGGAAGAGAT 635515 ||||| |||||||| || |||||||| ||| | | |||||| ||| | ||||||||| Sbjct 5280 ACAGAAGGAGATTCTGCAAAAACATTAGCTGTTGCAGGTCTTTCGGTTGTAGGAAGAGAT 5339 Query 635516 TATTATGGAGTTTTCCCACTTAGAGGAAAACTTTTGAATGTTAGGGATGCTAGTCCTaaa 635575 | ||||| ||||||| | | ||||||||||| ||||| || || || | |||| Sbjct 5340 AAGTATGGTGTTTTCCTTTTACGTGGAAAACTTTTAAATGTAAGAGAAGCATCTTATAAA 5399 Query 635576 aaaaTTGCTGATAATGAGGAAATTACAGCAATCaaaaaaaTTGTTGGACTTGAACAAGGA 635635 | || ||| ||||| ||| ||| || | ||||| ||| | ||| | |||| Sbjct 5400 CAGATAAGTGAAAATGAAGAAGTTAACTCATTAAAAAAGATTTTAGGATTGCAACATAAT 5459 Query 635636 AAAGTTTATGATGATCTCAAAGGTTTACGATATGGTAGTATTATGATTCTTGCTGATCAA 635695 || ||||||||| | || ||| ||||||| | |||||||| | | |||||| Sbjct 5460 AAGGTTTATGATACAGTTGAATCATTAAGATATGGACATGTTATGATTATGACAGATCAA 5519 Query 635696 GATGTTGATGGGTACCATATCAAAGGATTAATCATGAATTTTATCCATTGTTTTTGGCCA 635755 ||| ||||||| | ||||| || || || || || || ||| | || ||||| ||| Sbjct 5520 GATTTTGATGGATCTCATATAAAGGGGTTGATTATTAACTTTTTTGATCATTTTTATCCA 5579 Query 635756 TCT 635758 ||| Sbjct 5580 TCT 5582 >seq2324 Length=1560 Score = 138 bits (152), Expect = 9e-27 Identities = 200/281 (71%), Gaps = 1/281 (0%) Strand=Plus/Minus Query 635441 TGTACCCTAATTTTGACAGAGGGAGATTCAGCTAAAACATTCGCTATGTCTGGTCTTAAT 635500 ||||| | ||||| ||||| |||||||| || |||||||| ||| | | |||||| Sbjct 285 TGTACATTGATTTTAACAGAAGGAGATTCTGCAAAAACATTAGCTGTTGCGGGTCTTTCG 226 Query 635501 GTTATTGGAAGAGATTATTATGGAGTTTTCCCACTTAGAGGAAAACTTTTGAATGTTAGG 635560 ||| | ||||| ||| | ||||| |||||||| | | ||||||||||| ||||| || Sbjct 225 GTTGTAGGAAGGGATAAATATGGTGTTTTCCCTTTACGTGGAAAACTTTTAAATGTAAGA 166 Query 635561 GATGCTAGTCCTaaaaaaaTTGCTGATAATGAGGAAATTACAGCAATCaaaaaaaTTGTT 635620 || || | |||| |||| ||| ||||| ||| ||| || | ||||| ||| | Sbjct 165 GAAGCATCTTATAAACAAATAAGTGAAAATGAAGAAGTTAACTCACTAAAAAAGATTTTA 106 Query 635621 GGACTTGAACAAGGAAAAGTTTATGATGATCTCAAAGGTTTACGATATGGTAGTATTATG 635680 ||| | |||| || ||||||||| | || ||| ||||||| | ||||| Sbjct 105 GGATTGCAACATAATAAGGTTTATGATACGGTTGAATCATTAAGATATGGACATGTTATG 46 Query 635681 ATTCTTGCTGATCAAGATGTTGATGGGTACCATATCAAAGG 635721 ||| | | ||||||||| ||||||| | ||||| ||||| Sbjct 45 ATTATGACAGATCAAGATTTTGATGGATCTCATAT-AAAGG 6 >seq1405 Length=3791 Score = 118 bits (130), Expect = 8e-21 Identities = 306/459 (67%), Gaps = 12/459 (3%) Strand=Plus/Plus Query 303738 TCCACCATCTCTTGATCTACCTTCTGGCGCTTGTCTTGTAAGTAACTGTGTTGGTCCACG 303797 ||| ||||||||||| || ||||| | ||||||||| |||| ||| |||||| | Sbjct 1254 TCCTCCATCTCTTGACCTTCCTTCAACTGGTTGTCTTGTTAGTACTTGTAATGGTCCTCT 1313 Query 303798 AGCGCGTGAGTGGGCCTTGTCGCCTACCATTTGTTTCAATCTCTGATAATATGTCGGACC 303857 || | || || || ||||||| ||||| ||||| |||||||| || || || Sbjct 1314 TGCCCTACCATGCATTTTATCATCTACCATATGTTTTAATCTTTGATAATAAGTAGGTCC 1373 Query 303858 AATAAAAATTTTAACTGGTAATTTTTTACCATTCATTCCATTATACATAGTTTCATTACC 303917 |||||| || || || || ||| | |||| |||| ||||| | ||| ||||| || Sbjct 1374 AATAAAGATACTAGCTTTTAGTTTATAACCAGTCATACCATTGTGCATTACTTCATATCC 1433 Query 303918 CCATTCTTCATAACCAGCAGCAACTAA-TTCATCGTTAATGGCATTA-AGATCAACACTT 303975 || |||| |||| | ||| || | | || | || ||| || | Sbjct 1434 ACAGTCTTGATAATTGAATTCTCTTAACTTACTTGATATTTCTTCTACTGAT--ACTTTA 1491 Query 303976 GTAAATGGTGTTGCATCGCCATACACTCCTTTAACTGCACATAGTTTTCCTAATAAACAT 304035 ||||| ||||| ||||| || | | ||| | |||| | ||||||||| || ||| Sbjct 1492 GTAAAAGGTGTAGCATCTCCCTCTTCACCTGATAAAGCACTAACTTTTCCTAACAAGCAT 1551 Query 304036 TC-AATAAGTTGCCCAATAGTCATACGTTTGGGCATACAATTAGGATTGATAATAATATC 304094 || |||||| || |||||||||||||| || ||| || |||||| ||||| || || Sbjct 1552 TCTAATAAG-TGACCAATAGTCATACGAGATGGGATAGCATGAGGATTAATAATTATGTC 1610 Query 304095 GGGAATTAATC---CAGATTTACTGAATAACATATCTGCTCGATGAGCTTTGTATCCAAT 304151 ||||| | | || || || ||| |||||| || ||| | ||| || Sbjct 1611 AGGAATGATACCCTCACATGTA---AATGGCATATCCTCTTGATCTAAAATAATTCCTAT 1667 Query 304152 GGTACCTTTTTGACCTGCTCTTGACGAAAATTTATCACC 304190 || ||||| ||| | ||| || | |||||||||||| Sbjct 1668 TGTTCCTTTCTGAGCATGTCTAGAAGCAAATTTATCACC 1706 >seq239 Length=6437 Score = 113 bits (124), Expect = 3e-19 Identities = 112/145 (77%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 366966 TAATTTTATCAATAATAAAATAAAAATTGTAGTAGCCACAATAGCATTTGGTATGGGTAT 367025 |||||||| || ||| |||| | |||||||||| |||||||||||||| ||||| || Sbjct 5883 TAATTTTAATAACAATGTAATACAGGTTGTAGTAGCAACAATAGCATTTGGAATGGGAAT 5824 Query 367026 TAATAAACCGGATGTTAGAGTTGTTATTCATTATGGAGCTCCCAAGAATATTGAAGGTTA 367085 ||||||| ||||| ||| |||| ||||||||| | || ||| ||||||| || Sbjct 5823 AGATAAACCAGATGTAAGATTTGTAATTCATTATTCAATACCAAAGTCACTTGAAGGATA 5764 Query 367086 TTATCAAGAAATTGGTAGAGCAGGT 367110 ||||||||||| || || || ||| Sbjct 5763 TTATCAAGAAACAGGAAGGGCTGGT 5739 >seq121 Length=1372 Score = 107 bits (118), Expect = 1e-17 Identities = 170/241 (71%), Gaps = 2/241 (1%) Strand=Plus/Plus Query 668848 ATTAAGAGGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAACGTGTCGATATGTC 668907 ||||| ||||||||| || | |||||||| ||||||||| ||| | || ||| | || Sbjct 64 ATTAA-AGGTAAAGAGGGAAGAATTAGAGGTTGTTTGATGGGTAAAAGAGTTGATTTTTC 122 Query 668908 TGCACGTACAGTTATTACTTCTGATCCCAATATTGCTCTCAATGAAGTTGGTGTTCCTCT 668967 ||||||||| || |||||| ||||| || |||| || || || |||| ||||| | Sbjct 123 TGCACGTACTGTAATTACTCCTGATAGTAACATTGAACTTGATCAAATTGGATTTCCTAT 182 Query 668968 TATTATTGCTAAAAATCTTACTTTTGACGAAATTGTAACAGAACATAATATTGAGTATTT 669027 || | ||||||| | | || ||| |||| |||||| | ||||| | | | || Sbjct 183 TAAGTTAGCTAAAATTTTAACATTTCCTGAAAAAGTAACACCATTTAATAATCAAAAGTT 242 Query 669028 GACTCAATTAGTGAAAAATGGTAAAAGAGTATATCCGGGTGCCAATTTTGTAATCA-AAC 669086 ||| | || |||||| || | |||||| ||||| |||| |||||||| ||| Sbjct 243 ACAGAAATGTATTAATAATGGTCCAACTGAATATCCAGGTGCTAATTATGTAATCAGAAC 302 Query 669087 A 669087 | Sbjct 303 A 303 >seq2254 Length=1678 Score = 105 bits (116), Expect = 5e-17 Identities = 79/93 (85%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 671653 ACCTTTTGAATTTTTCTTCCAAGTAATGGCAGGTCGTGAAGGTATTATTAATACGGCTAT 671712 ||||| |||||||||||| || | |||| ||||||||||||||||||| |||| ||||| Sbjct 104 ACCTTATGAATTTTTCTTTCACGCTATGGGAGGTCGTGAAGGTATTATTGATACAGCTAT 163 Query 671713 TAAAACTGCTGATACTGGTTATATTCAAAGaaa 671745 ||||||| | || | ||| || ||||||||||| Sbjct 164 TAAAACTTCAGAGATTGGGTACATTCAAAGAAA 196 >seq1343 Length=599 Score = 96.9 bits (106), Expect = 3e-14 Identities = 104/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 366922 TATCATGCAGGTTTATCAAACGAACACAAAACAAAAACTCATACTAATTTTATCAATAAT 366981 ||||||||||||||||| || | | | | | ||| |||||||| || ||| Sbjct 143 TATCATGCAGGTTTATCTAAAAGAGAAAGAGTGTCAGTTCAAGATAATTTTAATAACAAT 84 Query 366982 AAAATAAAAATTGTAGTAGCCACAATAGCATTTGGTATGGGTATTAATAAACCGGATGTT 367041 |||| | |||||||||| |||||||||||||| ||||| || ||||||| ||||| Sbjct 83 GTAATACAGGTTGTAGTAGCAACAATAGCATTTGGAATGGGAATAGATAAACCAGATGTA 24 Query 367042 AGAGTTGTTATTCATTAT 367059 ||| |||| ||||||||| Sbjct 23 AGATTTGTAATTCATTAT 6 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780706082998864