Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hepatospora_20eriocheir_20[genbank_20GCA_5F002087875.1_202017-04-12] 2,344 sequences; 4,834,792 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq2324 91.5 2e-13 seq1073 82.4 9e-11 >seq2324 Length=1560 Score = 91.5 bits (100), Expect = 2e-13 Identities = 128/176 (73%), Gaps = 3/176 (2%) Strand=Plus/Plus Query 176912 TTCCCACGAAGAGGGAAGACACCGTAGTGATCGCGACCAACCACAGAGAGACCCGCAACC 176971 || ||||| | |||||| ||||| || | ||| | || || || || ||||||||||| Sbjct 182 TTTCCACGTAAAGGGAAAACACCATATTTATCCCTTCCTACAACCGAAAGACCCGCAACA 241 Query 176972 GCGAGCGTTTTCGCAGAATCACCCTCTGTCACGATGAGTGTACACT-TGCCAGATTGTGC 177030 || | ||||| |||||||| || ||||| | || | |||||||| || ||| | Sbjct 242 GCTAATGTTTTTGCAGAATCTCCTTCTGTTAAAATCAATGTACACTCTGAACTATT-TTT 300 Query 177031 CGTACCCGCCTTGTTCGCATCATCCAATTTGGGAATACCAG-TAATTTTGGACTTT 177085 ||||| || | || ||||| || ||||| |||||||| | |||||| ||||| Sbjct 301 AGTACCAGCATGATTAGCATCGTCTAATTTAGGAATACCTGTTAATTTCTTACTTT 356 >seq1073 Length=674 Score = 82.4 bits (90), Expect = 9e-11 Identities = 128/181 (71%), Gaps = 8/181 (4%) Strand=Plus/Minus Query 112278 TGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGAC 112337 |||| ||| ||| | | | | |||| ||||||||||| || || |||||||| || || Sbjct 464 TGGAGAGCAATTATAATGGCACAAATAGAGACTGGTACTCCTTACATGCTTTATAAGGAT 405 Query 112338 GCCTGTAACCAAAAGAGTA----ATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCT 112393 | || |||| ||| || ||||||||||| | || || || ||||| || | Sbjct 404 AC-TG---CCAATAGATTATCTAATCAAAAGAATCTTGGAACAATTAAAAGTTCTAATTT 349 Query 112394 CTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATC 112453 ||| | ||||| | || | | |||| || |||| |||||||| |||||||| |||| Sbjct 348 ATGTGCTGAAATAATTGAGTATTCAGATAATAATGAAACGGCTGTTTGTAACCTTTCATC 289 Query 112454 A 112454 | Sbjct 288 A 288 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620724212247680