Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hepatospora_20eriocheir_20[genbank_20GCA_5F002087875.1_202017-04-12] 2,344 sequences; 4,834,792 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq1073 95.1 1e-14 seq2081 86.0 7e-12 >seq1073 Length=674 Score = 95.1 bits (104), Expect = 1e-14 Identities = 121/167 (72%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 106478 TTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAA 106537 || ||||||||||| |||| ||||||| ||||| | ||||| | ||| || || ||| Sbjct 298 TTACAAACAGCCGTTTCATTATTATCTGAATACTCAATTATTTCAGCACATAAATTAGAA 357 Query 106538 CTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGC 106597 || ||||| || || | ||||||||| ||| | | ||| | |||||| || ||| Sbjct 358 CTTTTAATTGTTCCAAGATTCTTTTGATTAGATAATCTATTGGCAGTATCCTTATAAAGC 417 Query 106598 ATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCA 106644 ||||| || || || ||||| | |||| | | | |||||| |||| Sbjct 418 ATGTAAGGAGTACCAGTCTCTATTTGTGCCATTATAATTGCTCTCCA 464 >seq2081 Length=2078 Score = 86.0 bits (94), Expect = 7e-12 Identities = 123/171 (72%), Gaps = 8/171 (5%) Strand=Plus/Plus Query 106478 TTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAA 106537 || ||||||||||| |||| ||||||| ||||| | ||||| | ||| || || ||| Sbjct 418 TTACAAACAGCCGTTTCATTATTATCTGAATACTCAATTATTTCAGCACATAAATTAGAA 477 Query 106538 CTCTTAATCGTCCCCAAATTCTTTTG----GTTACTCTTTTTGTTGCACGCATCCTTGTA 106593 || ||||| || || | ||||||||| | || ||| | | ||| | |||||| || Sbjct 478 CTTTTAATTGTTCCAAGATTCTTTTGATTTGATAATCTAT---TAGCA-GTATCCTTATA 533 Query 106594 GAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCA 106644 ||||| || || || || ||||| | |||| | | | |||||| |||| Sbjct 534 AAGCATATAAGGAGTACCAGTCTCTATTTGTGCCATTATAATTGCTCTCCA 584 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589963513562560