Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hepatospora_20eriocheir_20[genbank_20GCA_5F002087875.1_202017-04-12] 2,344 sequences; 4,834,792 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq1858 275 7e-69 seq1918 141 1e-28 seq2081 138 1e-27 seq672 134 2e-26 >seq1858 Length=2805 Score = 275 bits (304), Expect = 7e-69 Identities = 606/895 (68%), Gaps = 19/895 (2%) Strand=Plus/Minus Query 18670 TTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACAT 18729 |||||||| | || || |||| ||||||||||||||||| || | ||||| || Sbjct 1593 TTTTGATAATTAGCTTCTTTTTTCTCAAAGAAATTAGTTTTACCTTGCAATGAAATGTTG 1534 Query 18730 TCCATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATC--CTAATTCTAATA 18787 |||||||||| ||||| ||| || || ||||| || || ||||||| | | Sbjct 1533 TCCATAAAATGGAATGGGTTTGGAGTGTTGTAAATTTTA--GACTCACCTAATTCATAAA 1476 Query 18788 GTAGTCTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATTCATTCCTATTA 18847 ||| |||||| || | ||||| ||| || |||| | | |||||| || |||| Sbjct 1475 GTAATCTATCAGCAATAAATTCAATGTACTCACTCATTTGTTTAGCATTCATCCCAATTA 1416 Query 18848 ATTTAACAGGTAGTGCATCTGTAAGAAATTCTTGTTCTATATTTACTGCCTCTGATATAA 18907 |||| ||||||| || || | || |||||||| |||||| | ||||| || | || Sbjct 1415 ATTTTACAGGTAAAGCCTCAGCAAAAAATTCTTTTTCTATTTCAACTGCTTCACGGACAA 1356 Query 18908 TAGATACAACTCTATCTTCATTAGGAGGGTATAGAAGATGTTTAAACATCAAACATGCAA 18967 || | || | || | ||| | | || | | || |||||| |||| Sbjct 1355 TATCTTTAA-TGTACGGTGATTTCTC---TCTGAAATACTCGTGAAG--CAAACAAGCAA 1302 Query 18968 AATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCA 19027 ||||| ||| | || || || || || | ||||||||||||||| | | |||| | Sbjct 1301 AATCAGTATGCAAACCTTCATCCCTTGAAATAAGTTCATTAGAAAATGTAAGAGCAGGAA 1242 Query 19028 TCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTT 19087 | ||||||||||| ||||| ||||| | |||||| ||||| |||||||||||||||| Sbjct 1241 GAATACCTCTTTTTTTCAACCAAAATATTGCAGCAAAAGATCCTGAAAAGAATATACCTT 1182 Query 19088 CTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGAATCCATT 19147 | || ||||| |||| | ||| || |||| ||||| ||||||||||| Sbjct 1181 CAACACAAGCAAATGCAATCATTCTAGTATCAAAACT---CTCATTTGAATGAATCCATT 1125 Query 19148 TCAGTGCCCAATCAGCCTTCTTTTTTACACATGG-CATTGTCTCTATAGAATTAAATAGA 19206 | || |||||||||||||| || || | | | || | ||| || ||| ||||||| | Sbjct 1124 TAAGAGCCCAATCAGCCTTTTTCTTAATAGAAGGATAATGT-TCAATACCGTTAAATA-A 1067 Query 19207 TACAT-ACGCTCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACATTTCTGA 19265 | || | |||| ||| || | | | |||||||| | ||| | || Sbjct 1066 AATATCCCTCTCACGATCATCCTTGATAAGAGTTTCTATCAACTTAGAGTATGTCTCATT 1007 Query 19266 ATGAATATTTTCTATAG-CCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGTA 19324 ||||| |||||| |||| ||| || || | ||||| | | ||||| || || | Sbjct 1006 ATGAACATTTTCAATAGAACAT-TGTAAACTATAAAATGACTTCACTTCTAACATGTGAA 948 Query 19325 CTTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAA 19384 |||| || ||| | ||| | ||||||| |||||| || ||||| ||||||||| | Sbjct 947 TTTCATTAGTAAAACGTTCTAATAAATTTTGATTAACAATACCATCTGAAGCTGCAAAGA 888 Query 19385 ATGCTAATACATGTTTAATAAAATGTTTTTCATCTGAGGTTAATGTATTCCAATCATTAA 19444 | |||| ||| |||||| ||| || ||||| | |||| || | |||||||| Sbjct 887 AAGCTAGCACAGTTTTAATGAAAAACTTCTCATCCTCGTTTAAAGTTTCAAAATCATTAG 828 Query 19445 TATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTTTATACA 19504 |||||||| || || | ||||||||| ||||||| ||| ||| |||||||||| Sbjct 827 CATCTTTAGTAAAGTCAATTTCTTCAACAGTCCAAATGACAGCAGATGCCTTTTTATACA 768 Query 19505 TGTTCCATATATCACGATATTGTATAGGAAATATAACAAATCTATTTTTATTTTC 19559 | ||| || || || |||| || || | ||| | | ||||| ||| |||| Sbjct 767 TCCCCCAAATCTCTGGAAATTGAATTGGCAGTATTGTATACCTATTATTACTTTC 713 >seq1918 Length=2592 Score = 141 bits (156), Expect = 1e-28 Identities = 306/455 (67%), Gaps = 7/455 (2%) Strand=Plus/Plus Query 47885 AGATGCTAGATTACATACAGCTACCTCATTTGGATTAGTATATTGTATTATTTCAGCACA 47944 |||||| || ||||| ||||| || | | | || | ||||| || ||||||||||| Sbjct 385 AGATGCAAGGTTACAAACAGCAACATTAGTACCATCTGAATATTCAATAATTTCAGCACA 444 Query 47945 TAGATTACCACATTTGATAGTACCCAAATTTTGATGATTATTNNNNTTGTTACATGCGTC 48004 | |||| || ||| || || || | ||| | |||||| | || | || Sbjct 445 CAAATTAGAACTTTTAATTGTTCCAAGATTCTTTTGATTAGATAATCTATTGGCAGTATC 504 Query 48005 CTTGTAAAGCATAAAAGGTGTTCCAGTTTCTATCTGAGATTCAATGATAGATTTCCAAAC 48064 ||| |||||||| |||| || ||||||||||| || | | || || | | |||||| Sbjct 505 CTTATAAAGCATGTAAGGAGTACCAGTTTCTATTTGTGCTGTTATTATTGCTCTCCAAAG 564 Query 48065 AGTCCTAGCCTTTATAACAGCTCTAG-CTTTATTATCATGTTCGTATTTAGTATATAACT 48123 | | ||||| | | ||| ||||| |||| || || || || | | |||||| Sbjct 565 ATTTCTAGCTCTAACAACCTTTCTAGACTTTGTTTTC----TCATAGTGATGATATAATG 620 Query 48124 TCTCAAATTCATCCCCATACACATTATCTAACCCAGGACATTCATTAGGA-CACATCAAT 48182 | |||||||| |||| ||| | || ||| || | |||||||| || || || Sbjct 621 ATTTAAATTCATTACCATGCACTTCATGTAATCCCTTAGCAACATTAGGATCAAATAAAC 680 Query 48183 GACCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAGCTATA 48242 ||| || ||||| |||| ||||| |||||||| ||| |||||||||||||||| | Sbjct 681 T-CCATTCATCATCTTTTTCAACTCTTTCCATAAATAAATCAGGTATCCAAAGAGCTAAA 739 Query 48243 AATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCAAGAAAGTCC 48302 || | || |||| | | || |||| ||| ||||| | | | || | ||| || Sbjct 740 AACATTTCTCTAGCACGCATATCCTCATCACCAGTATTCTTCCTTAAATCTAAAAATTCA 799 Query 48303 ATTATATCAGCATGCCATGGTTCTAAATATATTGC 48337 | ||||| |||||||||||| || || || || Sbjct 800 AAAATATCTTTATGCCATGGTTCCAAGTAAATAGC 834 >seq2081 Length=2078 Score = 138 bits (152), Expect = 1e-27 Identities = 308/459 (67%), Gaps = 15/459 (3%) Strand=Plus/Plus Query 47885 AGATGCTAGATTACATACAGCTACCTCATTTGGATTAGTATATTGTATTATTTCAGCACA 47944 ||||| || ||||| ||||| ||||| || | ||| | |||||||||||||| Sbjct 408 AGATGAAAGGTTACAAACAGCCGTTTCATTATTATCTGAATACTCAATTATTTCAGCACA 467 Query 47945 TAGATTACCACATTTGATAGTACCCAAATTTTGATGATTATTNNNNTTGTTACATGCGTC 48004 || |||| || ||| || || || | ||| | ||||| | ||| | || Sbjct 468 TAAATTAGAACTTTTAATTGTTCCAAGATTCTTTTGATTTGATAATCTATTAGCAGTATC 527 Query 48005 CTTGTAAAGCATAAAAGGTGTTCCAGTTTCTATCTGAG--ATTCAATGATAGATTTCCAA 48062 ||| ||||||||| |||| || ||||| ||||| || | ||| || || | | ||||| Sbjct 528 CTTATAAAGCATATAAGGAGTACCAGTCTCTATTTGTGCCATT--ATAATTGCTCTCCAA 585 Query 48063 ACAGTCCTAGCCTTTATAACAGCTCTAGCTTTA---TTATCATGTTCGTATTTAGTATAT 48119 | | | ||||| || | || ||| | ||| || ||||| | || |||| Sbjct 586 AGATTTCTAGCTTTCACAATTTTTCTTGACTTAGTTTTTTCATGATGATA------ATAT 639 Query 48120 AACTTCTCAAATTCATCCCCATACACATTATCTAACCCAGGACATTCATTAGGA-CACAT 48178 || | ||||||| |||||||| | || |||||| | |||||||| || || Sbjct 640 AATGATTTGAATTCATTACCATACACTTCATGTAACCCCTTAGCAACATTAGGATCAAAT 699 Query 48179 CAATGACCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAGC 48238 || |||||| | || |||| ||||| |||||||| ||| |||||||||||||| Sbjct 700 AAACT-CCAATCAGCGTCTTTTTCAACTCTTTCCATAAATAAATCAGGTATCCAAAGAGC 758 Query 48239 TATAAATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCAAGAAA 48298 | ||||| || |||| | | ||||||| ||| ||||| | | | || | ||| Sbjct 759 TGAAAATATTTCTCTAGCACGCATATCTTCATCACCAGTATTCTTCCTTAAATCTAAAAA 818 Query 48299 GTCCATTATATCAGCATGCCATGGTTCTAAATATATTGC 48337 || | ||||| | |||||||||||||| || || || Sbjct 819 TTCAAAAATATCTTCGTGCCATGGTTCTAAGTAAATAGC 857 >seq672 Length=876 Score = 134 bits (148), Expect = 2e-26 Identities = 304/454 (67%), Gaps = 7/454 (2%) Strand=Plus/Minus Query 47886 GATGCTAGATTACATACAGCTACCTCATTTGGATTAGTATATTGTATTATTTCAGCACAT 47945 |||| || ||||| ||||| ||||| || | ||| | ||||||||||||||| Sbjct 509 GATGAAAGGTTACAAACAGCCGTTTCATTATTATCTGAATACTCAATTATTTCAGCACAT 450 Query 47946 AGATTACCACATTTGATAGTACCCAAATTTTGATGATTATTNNNNTTGTTACATGCGTCC 48005 | |||| || ||| ||||| || | ||| | ||||| | ||| | ||| Sbjct 449 AAATTAGAACTTTTAATAGTTCCAAGATTCTTTTGATTTGATAATCTATTAGCAGTATCC 390 Query 48006 TTGTAAAGCATAAAAGGTGTTCCAGTTTCTATCTGAGATTCAATGATAGATTTCCAAACA 48065 || |||||||| |||| || ||||||||||| || | | || || | | |||||| | Sbjct 389 TTATAAAGCATGTAAGGAGTACCAGTTTCTATTTGTGCTGTTATTATTGCTCTCCAAAGA 330 Query 48066 GTCCTAGCCTTTATAACAGCTCTAG-CTTTATTATCATGTTCGTATTTAGTATATAACTT 48124 | ||||| | | ||| ||||| |||| || || || || | | |||||| Sbjct 329 TTTCTAGCTCTAACAACCTTTCTAGACTTTGTTTTC----TCATAGTGATGATATAATGA 274 Query 48125 CTCAAATTCATCCCCATACACATTATCTAACCCAGGACATTCATTAGGA-CACATCAATG 48183 | |||||||| |||||||| | || ||| || | |||||||| || || || Sbjct 273 TTTAAATTCATTACCATACACTTCATGTAATCCCTTAGCAACATTAGGATCAAATAAACT 214 Query 48184 ACCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAGCTATAA 48243 ||| | ||||| |||| ||||| |||||||| ||| |||||||||||||||| || Sbjct 213 -CCATTAATCATCTTTTTCAACTCTTTCCATAAATAAATCAGGTATCCAAAGAGCTAAAA 155 Query 48244 ATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCAAGAAAGTCCA 48303 | | || |||| | | || |||| ||| ||||| | | | || | ||| || | Sbjct 154 ACATTTCTCTAGCACGCATATCCTCATCACCAGTATTCTTCCTTAAATCTAAAAATTCAA 95 Query 48304 TTATATCAGCATGCCATGGTTCTAAATATATTGC 48337 | || |||||| |||||||| || || || Sbjct 94 AAACGTCTTTATGCCAAGGTTCTAAGTAAATAGC 61 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562092330212160