Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hepatospora_20eriocheir_20[genbank_20GCA_5F002087875.1_202017-04-12] 2,344 sequences; 4,834,792 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq1869 152 4e-31 seq1405 122 7e-22 seq2254 100 2e-15 seq2213 89.7 4e-12 seq1692 87.8 1e-11 seq1804 86.0 5e-11 >seq1869 Length=2780 Score = 152 bits (168), Expect = 4e-31 Identities = 159/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 563266 ACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCA 563325 |||||||| | |||||||| || || ||||||||| ||||||||| |||||| Sbjct 1281 ACAAGATGCAAAGTACTTTCCTTCTGTATGTTGTAATCACTCAGAGTTCTTCCATCTTCT 1340 Query 563326 AGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGA 563385 ||||||||||| ||||| |||||||| || || || |||||||| |||||||| |||||| Sbjct 1341 AGTTGTTTTCCCGCAAATATAAGTCTCTGTTGGTCTGGAGGAATACCTTCTTTGTCTTGA 1400 Query 563386 ATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTAACAGTTTTA 563445 ||||| ||| || | |||||| ||||| | || |||| | |||| ||||| Sbjct 1401 ATTTTCGCTTTAACAGTCTCAATAGTATCTGCTGGATCTAATTCTAATGTAATTGTTTTT 1460 Query 563446 CCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 || ||||| || || || ||||| ||||| Sbjct 1461 CCTGTAAGTGTCTTTACAAAAATCTGCAT 1489 >seq1405 Length=3791 Score = 122 bits (134), Expect = 7e-22 Identities = 273/405 (67%), Gaps = 4/405 (1%) Strand=Plus/Plus Query 344247 ACAATGGGTTTTATCTCCCACCATTTGTTTGAGACGTTGATAATATGTTGGACCAATGAA 344306 || ||| ||||||| | ||||| ||||| | | ||||||||| || || ||||| || Sbjct 1320 ACCATGCATTTTATCATCTACCATATGTTTTAATCTTTGATAATAAGTAGGTCCAATAAA 1379 Query 344307 TATTTTAACTTCCATTCTTTGTCCCGTCATTCCATTATACATTGTTTCATTTCCCCATGC 344366 || || ||| | | | | || ||||| ||||| | |||| ||||| ||| || | Sbjct 1380 GATACTAGCTTTTAGTTTATAACCAGTCATACCATTGTGCATTACTTCATATCCACAGTC 1439 Query 344367 TTCATGTCCTAAAGCTACTAAATCATCATTAATTTTATTAATATTA-ACTCCTGTAAATG 344425 || || || || ||| | | | | | ||| || | | ||| ||||| | Sbjct 1440 TTGATAATTGAATTCTCTTAACTTA-CTTGATATTTCTTCTACTGATACTTTAGTAAAAG 1498 Query 344426 GAGTTGCATCTCCATATACCCCTTTAATTGCACAAACTTTACCTAGTAAACATTCAATTA 344485 | || |||||||| | | | ||| | |||| |||||| |||| || ||||| | || Sbjct 1499 GTGTAGCATCTCCCTCTTCACCTGATAAAGCACTAACTTTTCCTAACAAGCATTCTAATA 1558 Query 344486 ATTGACCTATCGTCATACGTTTGGGCATACAATTAGGATTAATAATAATATCAGGAATTA 344545 | ||||| || |||||||| || ||| || |||||||||||| || |||||||| | Sbjct 1559 AGTGACCAATAGTCATACGAGATGGGATAGCATGAGGATTAATAATTATGTCAGGAATGA 1618 Query 344546 -ATCCTGATTTTGTGAATGGAAGATCTGCACGATGAATTTTAAATCCAACTGTTCCTTTT 344604 | ||| | ||| ||||| | ||| | ||| | ||| ||| | ||||||||| Sbjct 1619 TACCCTCA-CATGTAAATGGCATATCCTCTTGATCTAAAATAATTCCTATTGTTCCTTTC 1677 Query 344605 TGTCCAGCTCTTGATGAGAATTTATCACCTACTGCTGGAATTCTT 344649 || || ||| || | ||||||||||| | | || |||||| Sbjct 1678 TGAGCATGTCTAGAAGCAAATTTATCACCCCTTTCAGGTATTCTT 1722 >seq2254 Length=1678 Score = 100 bits (110), Expect = 2e-15 Identities = 147/207 (71%), Gaps = 1/207 (0%) Strand=Plus/Minus Query 390799 TTTTCAGTATTAATACCATTATCACCATATACACATTGAATTAATTTGTCATTGGCATTT 390858 |||| || || || |||| ||||||||| | |||| | | |||| |||||| Sbjct 307 TTTTTAGAATCAAATCCATCATCACCATACTTGAACTGAAAAATGCTATCATAAGCATTT 248 Query 390859 CTTACGGTACCATCATACTCTACTTTAATGTCTTCTAACATTTTAACTAATTTTCTTTGG 390918 || || | | ||| | |||||| ||||| | | |||| ||| |||||||| Sbjct 247 CTAACAGAATAGTCAAATAAAACTTTAGCATCTTCCATAGTCTTAATTAACTTTCTTTGA 188 Query 390919 ATATAACCAGTGTCTGCAGTTTTAATTGCAGTATTAATAATACCTTCTCTTCCTGCCATA 390978 || || ||| | |||| ||||||||| || |||| |||||||||||| | ||| ||||| Sbjct 187 ATGTACCCAATCTCTGAAGTTTTAATAGCTGTATCAATAATACCTTCACGACCTCCCATA 128 Query 390979 ACTTGGAAGAAAAATTCCATAGGATTG 391005 | || |||||||||| |||| | ||| Sbjct 127 GCGTGAAAGAAAAATT-CATAAGGTTG 102 >seq2213 Length=1767 Score = 89.7 bits (98), Expect = 4e-12 Identities = 188/276 (68%), Gaps = 16/276 (6%) Strand=Plus/Minus Query 368893 GCTGATTTTGTAACAGAATCAATTGATCAAACACGTGGTTGGTTTTATACCCTATTAGTA 368952 |||||||| || ||| || ||||||||| | || ||||||||||| || || Sbjct 971 GCTGATTTCATAGGTGAAGGTATCGATCAAACAAGGGGATGGTTTTATACTCTTCATGTT 912 Query 368953 TTATCCACAGCTATTTTCGATAAACCGGCTTTTAAAAATGTAATAGTAACTGGTATTGTT 369012 |||| ||| | | || | ||||| || ||||||||||| || || | ||| ||||| Sbjct 911 CTATCAACACTTTTATTTAACAAACCAGCATTTAAAAATGTGATTGTTAATGGAATTGTG 852 Query 369013 AATGCATCTGATGGTCAAAAGATGTCAAAAAG--TAAGGGTAATTATTCCGATC-CTAAT 369069 || | |||||| | || |||||||| || ||| | |||||| | ||| | || Sbjct 851 TTAGCTGCAGATGGTAAGAAAATGTCAAAGAGATTAAAG--AATTAT--CCATCACCAAC 796 Query 369070 A-----TTTTAATTGATAAATTTGGTGCTGATACTTTGAGATTATACCTATTGTCATCAC 369124 | ||||||| ||| ||||||||| | || || || || || | ||||||| Sbjct 795 AACAATCTTTAATTCATA----CGGTGCTGATTCATTAAGGTTTTATTTACTCTCATCAC 740 Query 369125 CTGTAGTAAAAGCAGAATCTATTAAATTTGATGAAA 369160 ||||||| | | ||| | | || ||| |||||| Sbjct 739 CTGTAGTTGAGGGTGAAAATTTAAAGTTTAATGAAA 704 >seq1692 Length=3260 Score = 87.8 bits (96), Expect = 1e-11 Identities = 170/249 (68%), Gaps = 4/249 (2%) Strand=Plus/Plus Query 368914 ATTGATCAAACACGTGGTTGGTTTTATACCCTATTAGTATTATCCACAGCTATTTTCGAT 368973 || ||||||||| | || ||||||||||| || || |||| ||| | | || | Sbjct 2624 ATCGATCAAACAAGGGGATGGTTTTATACTCTTCATGTTCTATCAACACTTTTATTTAAC 2683 Query 368974 AAACCGGCTTTTAAAAATGTAATAGTAACTGGTATTGTTAATGCATCTGATGGTCAAAAG 369033 ||||| || ||||||||||| || || | ||| ||||| || | |||||| | || Sbjct 2684 AAACCAGCATTTAAAAATGTGATTGTTAATGGAATTGTGTTAGCTGCAGATGGTAAGAAA 2743 Query 369034 ATGTCAAAAAG--TAAGGGTAATTATTCCGATCCTAATATTTTAATTGATAAATTTGGTG 369091 |||||||| || ||| |||||| | || | | | | ||||| || |||| Sbjct 2744 ATGTCAAAGAGATTAA--AAAATTATCCATCACCAACAACTATGTTTGATTCATACGGTG 2801 Query 369092 CTGATACTTTGAGATTATACCTATTGTCATCACCTGTAGTAAAAGCAGAATCTATTAAAT 369151 ||||| | || || || || || | |||||||||||||| | | ||| | | || | Sbjct 2802 CTGATTCATTAAGGTTTTATTTACTCTCATCACCTGTAGTTGAGGGTGAAAATTTAAAGT 2861 Query 369152 TTGATGAAA 369160 || |||||| Sbjct 2862 TTAATGAAA 2870 >seq1804 Length=5083 Score = 86.0 bits (94), Expect = 5e-11 Identities = 182/270 (67%), Gaps = 4/270 (1%) Strand=Plus/Minus Query 368893 GCTGATTTTGTAACAGAATCAATTGATCAAACACGTGGTTGGTTTTATACCCTATTAGTA 368952 |||||||| || ||| || || |||||| | || ||||||||||| || || Sbjct 4661 GCTGATTTCATAGGTGAAGGTATCGACCAAACAAGGGGATGGTTTTATACTCTTCATGTT 4602 Query 368953 TTATCCACAGCTATTTTCGATAAACCGGCTTTTAAAAATGTAATAGTAACTGGTATTGTT 369012 |||| ||| | | || | ||||| || ||||||||||| || || | ||| ||||| Sbjct 4601 CTATCAACACTTTTATTTAACAAACCAGCATTTAAAAATGTGATTGTTAATGGAATTGTG 4542 Query 369013 AATGCATCTGATGGTCAAAAGATGTCAAAAAG--TAAGGGTAATTATTCCGATCCTAATA 369070 || | |||||| | || |||||||| || ||| | |||||| | || | | Sbjct 4541 TTAGCTGCAGATGGTAAGAAAATGTCAAAGAGATTAAAG--AATTATCCATCACCAACAA 4484 Query 369071 TTTTAATTGATAAATTTGGTGCTGATACTTTGAGATTATACCTATTGTCATCACCTGTAG 369130 | ||||| || ||||||||| | || || || || || | ||||||||||||| Sbjct 4483 CAATGTTTGATTCATACGGTGCTGATTCATTAAGGTTTTATTTACTCTCATCACCTGTAG 4424 Query 369131 TAAAAGCAGAATCTATTAAATTTGATGAAA 369160 | | | ||| | | || ||| |||||| Sbjct 4423 TTGAGGGTGAAAATTTAAAGTTTAATGAAA 4394 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029172038708560