Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hepatospora_20eriocheir_20[genbank_20GCA_5F002087875.1_202017-04-12]
2,344 sequences; 4,834,792 total letters
Query= NC_021247.1
Length=228750
Score E
Sequences producing significant alignments: (Bits) Value
seq1858 158 2e-33
seq1869 107 3e-18
>seq1858
Length=2805
Score = 158 bits (174), Expect = 2e-33
Identities = 592/914 (65%), Gaps = 33/914 (4%)
Strand=Plus/Minus
Query 17779 AAATATTGATTTTGAATATATTTTTTATAATTAAA--AACTTGAA--TCTGTCGTGAAGA 17834
||||| ||||| |||| |||| ||| | | ||| ||||| || ||| || | ||||
Sbjct 1687 AAATAAAAATTTTAAATAAATTTATTA-ACTAAAATAAACTTAAAAATCT-TCATCAAGA 1630
Query 17835 -TAAAATCATCATTTTTATCA-----AAATTAGCTTTTTTG-TATTCTCCGACTTTTTTC 17887
|||| | |||||| || ||| || | || ||||| || | | ||||||||
Sbjct 1629 GTAAAGTTATCATTGTTTTCATATCCAACAAAACTCTTTTGATAATTAGCTTCTTTTTTC 1570
Query 17888 TCGAAGAAATTTGTCTTTCCTTCCAATGATATTAAATTCATAAAATCAAATGGATTAGTG 17947
|| |||||||| || || |||| |||||| || | |||||||| ||||| || |
Sbjct 1569 TCAAAGAAATTAGTTTTACCTTGCAATGAAATGTTGTCCATAAAATGGAATGGGTTTGGA 1510
Query 17948 GTTTTATAATATTTTTCTTGTATTAATTCGTATAATAATCTATCTGCTACAAATTCGACA 18007
|| || ||| ||| | |||||| || | ||||||||| || | |||||| |
Sbjct 1509 GTGTTGTAAATTTTAGACTCACCTAATTCATAAAGTAATCTATCAGCAATAAATTCAATG 1450
Query 18008 TATTGTGACATCAAATCGCAATTCATACCTAGTAGTCTGAAAGGTAGAGCATCAATAATA 18067
|| | ||| | |||||| || | || | | | ||||| ||| ||| || |
Sbjct 1449 TACTCACTCATTTGTTTAGCATTCATCCCAATTAATTTTACAGGTAAAGCCTCAGCAAAA 1390
Query 18068 AATTCTTTCTCTATCTCAACAGACTCTTTTATTATGTTTATTACCCTAGATTTTGGCAAT 18127
|||||||| ||||| ||||| | || | || | | ||| || || ||
Sbjct 1389 AATTCTTTTTCTATTTCAACTGCTTCACGGACAATATCT-TTAATGTAC-----GGTGAT 1336
Query 18128 TTATTAATTATGTGATTATAATATAATAAACACGCAAAATCAGTGTGTAAACCTTCATCT 18187
|| | | || || | | | ||||| ||||||||||| || |||||||||||
Sbjct 1335 TTCTC---TCTGAAATACTCGTGAAGCAAACAAGCAAAATCAGTATGCAAACCTTCATCC 1279
Query 18188 CTGGATATTAATTCGTTACTAAACGTTAACCCGGGCATTATACCTCttttttttAGCCAA 18247
|| || || | ||| ||| ||| || | | || | |||||||||||||| | ||||
Sbjct 1278 CTTGAAATAAGTTCATTAGAAAATGTAAGAGCAGGAAGAATACCTCTTTTTTTCAACCAA 1219
Query 18248 AATATCGATGCGAAACTACTAGAAAAGAATATACCCTCAACGCACGCGAACGCTATTAAT 18307
||||| | || ||| | |||||||||||||| ||||| || || || || || | |
Sbjct 1218 AATATTGCAGCAAAAGATCCTGAAAAGAATATACCTTCAACACAAGCAAATGCAATCATT 1159
Query 18308 CTTTCAGCAAAACTGT-ATTT-ATTGCTCAGTATCCATTTTTGTGCCCATTCTCCTTNNN 18365
|| | ||||||| | |||| | | | |||||||| | ||||| || | |
Sbjct 1158 CTAGTATCAAAACTCTCATTTGAAT-----GAATCCATTTAAGAGCCCAATCAGCCTTTT 1104
Query 18366 NNNNNATACACGGTATACT-CTCTATAGCATTAAACAAATCATCTTTTTCTTTGGAATCT 18424
||| | || ||| | || ||| | ||||| ||| ||| | || |||
Sbjct 1103 TCTTAATAGAAGG-ATAATGTTCAATACCGTTAAATAAAATATCCCTCTCACGATCATCC 1045
Query 18425 TTTATATAAGTGTCGATTAACAAAGAATACATTTCAGAATGTATGCTTTCCATAGCTATC 18484
|| ||| ||| || || ||| ||| || | ||| ||| | |||| ||||
Sbjct 1044 TTGATAAGAGTTTCTATCAACTTAGAGTATGTCTCATTATGAACATTTTCAATAGAACAT 985
Query 18485 TGAAAACTATAAAACGATCTAGCCTCGGGATAT-TGAATCTCGCTATAAAATCTTTCTAC 18543
|| ||||||||||| || || || | || ||||| || || ||| | |||||
Sbjct 984 TGTAAACTATAAAATGA-CTTCACTTCTAACATGTGAATTTCATTAGTAAAACGTTCTAA 926
Query 18544 CAAATTCTCATTAACTATACCGTCAGCAGATGCGAAAAATGCCAAAACATATTTAATGAA 18603
||||| | |||||| ||||| || | || ||| || || || | ||| |||||||||
Sbjct 925 TAAATTTTGATTAACAATACCATCTGAAGCTGCAAAGAAAGCTAGCACAGTTTTAATGAA 866
Query 18604 ATGTTTTTCATTATCCTTGAGATTGTTCCATTCATCTATATCTTTTGATAGATCAACTTC 18663
| || |||| || || | | | | | |||| |||||| | | |||| |||
Sbjct 865 AAACTTCTCATCCTCGTTTAAAGTTTCAAAATCATTAGCATCTTTAGTAAAGTCAATTTC 806
Query 18664 TTCCGATGTCCAAA 18677
||| |||||||
Sbjct 805 TTCAACAGTCCAAA 792
>seq1869
Length=2780
Score = 107 bits (118), Expect = 3e-18
Identities = 163/232 (70%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 155819 TAAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGA 155878
||||||||| || ||| | || ||| | || |||||||| |||||||||||| | ||
Sbjct 1493 TAAAATGCAGATTTTTGTAAAGACACTTACAGGAAAAACAATTACATTAGAATTAGATCC 1434
Query 155879 TTCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGA 155938
| |||| |||| | || ||| ||||| ||||| |||||||| || ||||||||
Sbjct 1433 AGCAGATACTATTGAGACTGTTAAAGCGAAAATTCAAGACAAAGAAGGTATTCCTCCAGA 1374
Query 155939 ACAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTA 155998
||||| ||| | || | ||| || || || || |||||| |||||| | |||||
Sbjct 1373 CCAACAGAGACTTATATTTGCGGGAAAACAACTAGAAGATGGAAGAACTCTGAGTGATTA 1314
Query 155999 TAATATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050
|| ||| || || || | ||| | || |||||| | ||||| |||
Sbjct 1313 CAACATACAGAAGGAAAGTACTTTGCATCTTGTTTTAAGACTTAGAGGTGGT 1262
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 731850556150400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |