Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hepatospora_20eriocheir_20[genbank_20GCA_5F002087875.1_202017-04-12] 2,344 sequences; 4,834,792 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq1858 221 2e-52 seq1869 132 9e-26 >seq1858 Length=2805 Score = 221 bits (244), Expect = 2e-52 Identities = 381/544 (70%), Gaps = 22/544 (4%) Strand=Plus/Minus Query 38832 TTTTGGTATTCAGAAACttttttttCGAAAAAGTTTGTTTTTCCTTCTAATGATATTAAA 38891 ||||| || | || ||||||| || || || || ||||| |||| ||||| || Sbjct 1593 TTTTGATAATTAGCTTCTTTTTTCTCAAAGAAATTAGTTTTACCTTGCAATGAAATGTTG 1534 Query 38892 TTCATAAAATCAAATGGATTTTTGGTATTATAATATTTT----TCTCCTATCAATACATA 38947 | |||||||| ||||| ||| || || ||| ||||| || |||| || |||| Sbjct 1533 TCCATAAAATGGAATGGGTTTGGAGTGTTGTAA-ATTTTAGACTCACCTA---ATTCATA 1478 Query 38948 TAATAATCTATCGGCCACAAATTCAACATATTGTAACATTAATTCACAATTCATACCCAA 39007 | ||||||||| || | |||||||| || | |||| || | |||||| || | Sbjct 1477 AAGTAATCTATCAGCAATAAATTCAATGTACTCACTCATTTGTTTAGCATTCATCCCAAT 1418 Query 39008 TAATTTAAATGGTAATGCATCATCAATAAATTCtttttctatttctacagcttgtttaat 39067 |||||| | ||||| || ||| ||| |||||||||||||||||| || |||| | Sbjct 1417 TAATTTTACAGGTAAAGCCTCAGCAAAAAATTCTTTTTCTATTTCAACTGCTTC---ACG 1361 Query 39068 tatcataattatattattttttgataatttatatttaatatgattcgcatataGTAAACA 39127 | ||| | ||| | | | | |||| | | | | || | ||| | || ||||| Sbjct 1360 GACAATATCT---TTAATGTACGGTGATTTCTCTCTGAAAT-ACTCG--TGAAGCAAACA 1307 Query 39128 TGCAAAATCCGTATGTAAACCTTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCC 39187 |||||||| ||||| |||||||| ||||| || |||| ||||||| ||| || | | Sbjct 1306 AGCAAAATCAGTATGCAAACCTTCATCCCTTGAAATAAGTTCATTAGAAAATGTAAGAGC 1247 Query 39188 TGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATAT 39247 || | | ||||| ||||| | ||||||||||| |||||| | ||||||||||| Sbjct 1246 AGGAAGAATACCTCTTTTTTTCAACCAAAATATTGCAGCAAAAGATCCTGAAAAGAATAT 1187 Query 39248 ACCCTCCACACACGCAAATGCTATTATTCTTG-CTCCAAACATTAATTTATCATCTAAAA 39306 ||| || ||||| |||||||| || ||||| | || |||| | |||| || || Sbjct 1186 ACCTTCAACACAAGCAAATGCAATCATTCTAGTATCAAAACTCTCATTT-GAAT---GAA 1131 Query 39307 TCCAATTTATGGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCTTTAA 39366 |||| || | |||||||| || ||||| || |||||||| || ||| ||| | |||| Sbjct 1130 TCCATTTAAGAGCCCAATCAGCCTTTTTCTTAATAGAAGGATAATGTTCAATACCGTTAA 1071 Query 39367 ATAA 39370 |||| Sbjct 1070 ATAA 1067 >seq1869 Length=2780 Score = 132 bits (146), Expect = 9e-26 Identities = 169/233 (73%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 171841 TACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTG 171900 ||||||||||||||| ||| || | ||| |||||| || || || || ||||| Sbjct 1261 TACCACCTCTAAGTCTTAAAACAAGATGCAAAGTACTTTCCTTCTGTATGTTGTAATCAC 1320 Query 171901 ATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTG 171960 | || || | | || || | |||||| || ||||| || | |||||||||||| || | Sbjct 1321 TCAGAGTTCTTCCATCTTCTAGTTGTTTTCCCGCAAATATAAGTCTCTGTTGGTCTGGAG 1380 Query 171961 GTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTA 172020 | || |||||||| ||||| ||||| ||| ||| | |||||||||| | |||| Sbjct 1381 GAATACCTTCTTTGTCTTGAATTTTCGCTTTAACAGTCTCAATAGTATCTGCTGGATCTA 1440 Query 172021 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTTa 172073 ||||| ||||| ||||| || || | ||| || | || |||||||||||| Sbjct 1441 ATTCTAATGTAATTGTTTTTCCTGTAAGTGTCTTTACAAAAATCTGCATTTTA 1493 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905109479515200