Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hepatospora_20eriocheir_20[genbank_20GCA_5F002087875.1_202017-04-12] 2,344 sequences; 4,834,792 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq1858 134 4e-26 >seq1858 Length=2805 Score = 134 bits (148), Expect = 4e-26 Identities = 462/705 (66%), Gaps = 23/705 (3%) Strand=Plus/Plus Query 133230 TAGCGTTTTTTGCTGCGAGTGATGGTATTGTTCTTGAAAATTTAGGAACACGGTTTATGG 133289 |||| || ||||| || |||||||||||| | |||||||| | ||| |||| Sbjct 882 TAGCTTTCTTTGCAGCTTCAGATGGTATTGTTAATCAAAATTTATTAGAACGTTTTACTA 941 Query 133290 GAGAAGTTCAACTGGCCGAAGCCCGTGCCTTTTATGGGCTACAGATTGCGATGGAAAATA 133349 ||| |||| || |||| | |||||| | |||| | | || |||||| Sbjct 942 ATGAAATTCACATGTTAGAAGTGAAGTCATTTTATAGTTTACAATGTTCTATTGAAAATG 1001 Query 133350 TCCATTCTATCACATATTCTACTCTAATTGATACTTACATCAAAGAT-ACCGTCCAGAAG 133408 | ||| | ||||| |||| | || || ||| ||||| ||| | ||| ||| | Sbjct 1002 TTCATAATGAGACATACTCTAAGTTGATAGAAACTCTTATCAAGGATGATCGTG-AGAGG 1060 Query 133409 CACAAACTATTCAACGCCATTAGCGAATTTCCTTGTATTAAAAAGAAATCTGACTGGGCT 133468 | | |||| |||| ||| | | ||||| |||||| || || |||| |||||| Sbjct 1061 GATATTTTATTTAACGGTATTGAACATTATCCTTCTATTAAGAAAAAGGCTGATTGGGCT 1120 Query 133469 ATTAAATGGATCCAGGACAAGCGTGCGAGTTTTGCTACTCGTCTCGTTGCTTTTGCTGTA 133528 |||||||||| || || || |||||||| |||| | | |||| |||||| Sbjct 1121 CTTAAATGGATTCATTCAAA---TGAGAGTTTTGATACTAGAATGATTGCATTTGCTTGT 1177 Query 133529 GTAGAGGGCAtttt--tttCAGTGGTGCGTTCTGCT-CTATTTTTTGGCTTAAAAAGCGT 133585 || || || || || |||||| | | || |||| | || |||||| | ||||| | Sbjct 1178 GTTGAAGGTATATTCTTTTCAG--GATCTTT-TGCTGCAATATTTTGGTTGAAAAAAAGA 1234 Query 133586 GGTATTCTACCTGGACTGTGTTTTTCTAACGAACTTATTTCAAGGGACGAGGCACTTCAC 133645 |||||||| |||| || |||||||| ||||||||||||||||| || | | || Sbjct 1235 GGTATTCTTCCTGCTCTTACATTTTCTAATGAACTTATTTCAAGGGATGAAGGTTTGCAT 1294 Query 133646 ACCGAATTTGCCGTTTTACTTCAC-TCTAAATTAGAGCGACCACTCAAAAAGAATAAGAT 133704 || || ||||| ||| |||||| || | |||| || | ||| | || Sbjct 1295 ACTGATTTTGCTTGTTTGCTTCACGAGTATTTCAGAGAGA--AATCA-----CCGTACAT 1347 Query 133705 TGAAGAAATTATTAGAGAAGCGGTTGAAATTGAGGTTGAATTTATCAATAGTGCTCTGCC 133764 | |||| ||| | | ||||| |||||||| || |||||| | | ||| | || Sbjct 1348 TAAAGATATTGTCCGTGAAGCAGTTGAAATAGAAAAAGAATTTTTTGCTGAGGCTTTACC 1407 Query 133765 GTGCCGTTTAATTGGTATGAATGATGTGCTGATGCAGCG-TTATATTGAATTTGTAGCTG 133823 |||||||| ||||||| | | ||| || | || ||||||||| | |||| Sbjct 1408 TGTAAAATTAATTGGGATGAATGCTAAACAAATG-AGTGAGTACATTGAATTTATTGCTG 1466 Query 133824 ACAGATTGGCCGTTCAGTTAGGTGGGGATAAGATTTACGGTTCCGCCAATCCATTCGACT 133883 | ||||| | | ||||||| | ||| |||||| | | || |||||| | | Sbjct 1467 ATAGATTACTTTATGAATTAGGTGAGTCTAAAATTTACAACACTCCAAACCCATTCCATT 1526 Query 133884 GGATGGAGAGCATTAGCATTG-AATCAAAGACTAATTTCTTCGAG 133927 ||||| | |||| ||||| || || ||||||||||| ||| Sbjct 1527 TTATGGACAACATT-TCATTGCAAGGTAAAACTAATTTCTTTGAG 1570 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471773397637928