Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hepatospora_20eriocheir_20[genbank_20GCA_5F002087875.1_202017-04-12] 2,344 sequences; 4,834,792 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq1869 87.8 1e-12 >seq1869 Length=2780 Score = 87.8 bits (96), Expect = 1e-12 Identities = 160/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 107552 TAAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGC 107611 ||||||||| |||||||| || || | ||||| ||||| ||||| | ||| || | Sbjct 1493 TAAAATGCAGATTTTTGTAAAGACACTTACAGGAAAAACAATTACATTAGAATTAGATCC 1434 Query 107612 TGGCGATACTGTCG-GCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGG 107670 | |||||| | | | | | |||| | ||| ||| || |||||||| | || | Sbjct 1433 AGCAGATACTATTGAGACTGTTAAAGCGAAA-ATTCAAGACAAAGAAGGTATTCCTCCAG 1375 Query 107671 ATCAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACT 107730 | || ||||||||||| | |||||| ||||| || || || | | ||| || || | Sbjct 1374 ACCAACAGAGACTTATATTTGCGGGAAAACAACTAGAAGATGGAAGAACTCTGAGTGATT 1315 Query 107731 ACAACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 ||||||| || ||||| ||| ||||| | || || ||| | |||| || Sbjct 1314 ACAACATACAGAAGGAAAGTACTTTGCATCTTGTTTTAAGACTTAGAGGTGG 1263 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398865405087016