Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hepatospora_20eriocheir_20[genbank_20GCA_5F002087875.1_202017-04-12] 2,344 sequences; 4,834,792 total letters Query= NC_023615.1 Length=196456 Score E Sequences producing significant alignments: (Bits) Value seq1405 93.3 5e-14 seq121 91.5 2e-13 seq265 82.4 1e-10 >seq1405 Length=3791 Score = 93.3 bits (102), Expect = 5e-14 Identities = 149/209 (71%), Gaps = 4/209 (2%) Strand=Plus/Minus Query 192502 TAAATTATCCACAAAAACCACTTGTTACCACA-GATAT-TGCAAAATTTAATAAATTAGA 192559 ||| ||||||||| ||||| | || || ||| | | | || || | |||| || | | Sbjct 2242 TAATTTATCCACAGAAACCTTTAGTAACTACACGTTCTATGGAATACTTAAAGTATAA-A 2184 Query 192560 CGATTATCCAAATGGTATTAATGCTATTGTTGCTATAGCTTGCTATACTGGCTATAACCA 192619 |||| || | ||| ||| |||||||||||| ||||| |||||||| ||||| || Sbjct 2183 GAATTA-CCTAGTGGACAGAATTGTATTGTTGCTATTGCTTGTTATACTGGTTATAATCA 2125 Query 192620 AGAAGACAGTATTATTTTAAATAAAGCTTCTATTGAAAGAGGATTATTTGGCACTATAAC 192679 ||||| |||||| | |||| ||| ||||||| ||||| |||||| | | | | Sbjct 2124 GGAAGATTCAATTATTATGAATAGGGCTGCTATTGATAGAGGGTTATTTAGATCATTTAT 2065 Query 192680 TTATAATACATATACAGTTGAAGAAACAA 192708 ||||| |||||| | | | |||||| || Sbjct 2064 TTATAGAACATATTCTGATCAAGAAAAAA 2036 >seq121 Length=1372 Score = 91.5 bits (100), Expect = 2e-13 Identities = 162/231 (70%), Gaps = 14/231 (6%) Strand=Plus/Plus Query 50284 CTTGAAGTTGGAGACTTGGTTAAAAGACAATTGATAGATGGTGATGATGTACTATTAAAT 50343 |||||| ||||| | ||| ||||||| || ||||| ||| | ||| || || ||| Sbjct 349 CTTGAAATTGGATCTGTTGTTGAAAGACATTTACAAGATGATGACGTTGTTCTCTTCAAT 408 Query 50344 AGGCAACCAACACTTCATAAAGCTTCTATG------CAAAGTTTTAAAGTTAAAATTCAA 50397 || ||||| ||||||| ||| |||||| || || |||| || |||| | Sbjct 409 AGACAACCTTCACTTCACAAAATGTCTATGATGGCTCACAGAATTAAGGT---AATTAA- 464 Query 50398 CCAGTAAAAACATTTAAAATGAAT-TTAGCTATGACTAAAGCATATAATGCTGATTTTGA 50456 |||||||| | |||| | ||| |||| | |||| | |||||||| |||||||| Sbjct 465 -CAGTAAAA-CTTTTACTGTAAATCTTAG-TGCAACTACTCCTTATAATGCAGATTTTGA 521 Query 50457 TGGGGATGAAATGAATTTACATGTTCCTCAATCATATGGAGCTACTGCTGA 50507 ||| |||||||||||| |||| || || || | ||| | ||| ||||| Sbjct 522 TGGTGATGAAATGAATGTACACGTACCACAGACTTATTTAACTAAGGCTGA 572 >seq265 Length=6307 Score = 82.4 bits (90), Expect = 1e-10 Identities = 135/195 (69%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 165160 ATTAAAGTTGCTCAATTAAGTGGGTATGTTGCAGAACAAACAGATTATAAACATGGTGAA 165219 |||||||| |||| || | ||| |||||| | ||||| ||| |||| | ||||| ||| Sbjct 6087 ATTAAAGTATCTCAGTTGATTGGTTATGTTTCTGAACACGCAGCTTATCATCATGGAGAA 6146 Query 165220 CAAAATTTATGTGAAACTATAATTAAGTTTGCCCAAGATTTTGTTGGTACAAATAATATA 165279 ||||| | || |||||||| || || | |||||||||||| | |||||||| Sbjct 6147 ATGTCTTTATCGAATACAATAATTAATTTAGCGTATGATTTTGTTGGTTCTAATAATATT 6206 Query 165280 GCATTACTTGAACCTGATGGTCAATTTGGTACCAGATTAGAAGGAGGTAAAGATTCTGCG 165339 ||| | || | ||| |||||| | | || | ||||| | ||| ||| Sbjct 6207 AACTTATTAATGCCAGCAGGTACTTTTGGTTCACGTTTGAAGGGAGGAGATGATCATGCT 6266 Query 165340 GCATCAAGATATATT 165354 |||||||||||||| Sbjct 6267 TCATCAAGATATATT 6281 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628512784035840