Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hepatospora_20eriocheir_20[genbank_20GCA_5F002087875.1_202017-04-12] 2,344 sequences; 4,834,792 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq1073 98.7 1e-15 seq2081 89.7 6e-13 seq672 89.7 6e-13 >seq1073 Length=674 Score = 98.7 bits (108), Expect = 1e-15 Identities = 127/173 (73%), Gaps = 2/173 (1%) Strand=Plus/Plus Query 111251 TTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAA 111310 || ||||||||||| |||| ||||||| ||||| | ||||| | |||||| || ||| Sbjct 298 TTACAAACAGCCGTTTCATTATTATCTGAATACTCAATTATTTCAGCACATAAATTAGAA 357 Query 111311 CTCTTAATCGTCCCCAAATTCTTTTGGTTA-CTCTTCTTGTTGCACGCATCCTTGTAGAG 111369 || ||||| || || | ||||||||| ||| | ||| | ||| | |||||| || || Sbjct 358 CTTTTAATTGTTCCAAGATTCTTTTGATTAGATAATCTATTGGCA-GTATCCTTATAAAG 416 Query 111370 CATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAACAT 111422 |||||| || || || ||||| | |||| | | ||| || |||||| || Sbjct 417 CATGTAAGGAGTACCAGTCTCTATTTGTGCCATTATAATTGCTCTCCAAAGAT 469 >seq2081 Length=2078 Score = 89.7 bits (98), Expect = 6e-13 Identities = 125/173 (72%), Gaps = 2/173 (1%) Strand=Plus/Plus Query 111251 TTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAA 111310 || ||||||||||| |||| ||||||| ||||| | ||||| | |||||| || ||| Sbjct 418 TTACAAACAGCCGTTTCATTATTATCTGAATACTCAATTATTTCAGCACATAAATTAGAA 477 Query 111311 CTCTTAATCGTCCCCAAATTCTTTTG-GTTACTCTTCTTGTTGCACGCATCCTTGTAGAG 111369 || ||||| || || | ||||||||| || | ||| | ||| | |||||| || || Sbjct 478 CTTTTAATTGTTCCAAGATTCTTTTGATTTGATAATCTATTAGCA-GTATCCTTATAAAG 536 Query 111370 CATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAACAT 111422 ||| || || || || ||||| | |||| | | ||| || |||||| || Sbjct 537 CATATAAGGAGTACCAGTCTCTATTTGTGCCATTATAATTGCTCTCCAAAGAT 589 >seq672 Length=876 Score = 89.7 bits (98), Expect = 6e-13 Identities = 125/173 (72%), Gaps = 2/173 (1%) Strand=Plus/Minus Query 111251 TTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAA 111310 || ||||||||||| |||| ||||||| ||||| | ||||| | |||||| || ||| Sbjct 500 TTACAAACAGCCGTTTCATTATTATCTGAATACTCAATTATTTCAGCACATAAATTAGAA 441 Query 111311 CTCTTAATCGTCCCCAAATTCTTTTG-GTTACTCTTCTTGTTGCACGCATCCTTGTAGAG 111369 || ||||| || || | ||||||||| || | ||| | ||| | |||||| || || Sbjct 440 CTTTTAATAGTTCCAAGATTCTTTTGATTTGATAATCTATTAGCA-GTATCCTTATAAAG 382 Query 111370 CATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAACAT 111422 |||||| || || || || || | |||| | | | || || |||||| || Sbjct 381 CATGTAAGGAGTACCAGTTTCTATTTGTGCTGTTATTATTGCTCTCCAAAGAT 329 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628013598662400