Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hepatospora_20eriocheir_20[genbank_20GCA_5F002087875.1_202017-04-12] 2,344 sequences; 4,834,792 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq1858 170 3e-37 seq1918 105 9e-18 seq672 93.3 6e-14 >seq1858 Length=2805 Score = 170 bits (188), Expect = 3e-37 Identities = 548/832 (66%), Gaps = 44/832 (5%) Strand=Plus/Minus Query 47870 TTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTCCATAAAATCAAATGGATT 47929 |||||| || ||||||||||| |||| |||||| || || |||||||||| ||||| || Sbjct 1573 TTTCTCAAAGAAATTAGTTTTACCTTGCAATGAAATGTTGTCCATAAAATGGAATGGGTT 1514 Query 47930 AACTGCATTATAAAtttttttAAATCCTAATTCTGAAATCAGTCTATCTGCAACGAATTC 47989 | || |||||||| |||||||| ||| | |||||| |||| ||||| Sbjct 1513 TGGAGTGTTGTAAATTTTAGACTCACCTAATTCATAAAGTAATCTATCAGCAATAAATTC 1454 Query 47990 TATATATCTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGTAGAGCCTCCGT 48049 || || |||| || | |||||| || || | ||| || |||| |||||| | Sbjct 1453 AATGTACTCACTCATTTGTTTAGCATTCATCCCAATTAATTTTACAGGTAAAGCCTCAGC 1394 Query 48050 AAGAAACTCTTGTTCGATAGTGACAGCATC-----CACTATTATCGATGTTACCGT--TT 48102 || ||| |||| ||| || || || || || ||| | |||| || || || Sbjct 1393 AAAAAATTCTTTTTCTATTTCAACTGCTTCACGGACAATATCTTTAATGT-ACGGTGATT 1335 Query 48103 CCTCACTTGGTGGATACAACAAATGTTTAAACATTAAACATGCAAAATCACAATGAAGAC 48162 ||| || |||| | | || || |||| ||||||||| ||| | || Sbjct 1334 TCTCTCTGAA---ATAC------TCGTGAAGCA---AACAAGCAAAATCAGTATGCAAAC 1287 Query 48163 CTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTT 48222 ||||||| || ||| | ||| ||||||||||| ||| | || | | || | ||||| Sbjct 1286 CTTCATCCCTTGAAATAAGTTCATTAGAAAATGTAAGAGCAGGAAGAATACCTCTTTTTT 1227 Query 48223 TGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATG 48282 | | |||||||||||| || |||||||| ||||||||||| ||||| || ||||||| Sbjct 1226 TCAACCAAAATATTGCAGCAAAAGATCCTGAAAAGAATATACCTTCAACACAAGCAAATG 1167 Query 48283 CGGTAAGTCTCTCTCCGTAACTGGCTTCGTTG--TGTATCCACCGTTGTGCCCAATCAGC 48340 | | | ||| | |||| || ||| || ||||| | ||||||||||| Sbjct 1166 CAATCATTCTAGTATCAAAACT--CTCATTTGAATGAATCCATTTAAGAGCCCAATCAGC 1109 Query 48341 CTTCTTCTTTACACAAGG-CATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATTGC 48399 ||| ||||| | | |||| | || ||| ||| | ||||| | || | | ||| Sbjct 1108 CTTTTTCTTAATAGAAGGATAATG-TTCAATACCGTTAAATAAAATATCCCTCTCACGAT 1050 Query 48400 TATCTTTAACGTAAGTATCTATTAA--AAGACTATACATTTCGGAGTGAATATTTTCAAT 48457 ||| || | ||| ||||| || ||| ||| | || |||| ||||||||| Sbjct 1049 CATCCTTGATAAGAGTTTCTATCAACTTAGAGTAT--GTCTCATTATGAACATTTTCAAT 992 Query 48458 TG-CCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTACCTCCGTACAAAATC 48516 | ||| || || | ||||| | || ||||| || || | || || ||| | Sbjct 991 AGAACAT-TGTAAACTATAAAATGACTTCACTTCTAACATGTGAATTTCATTAGTAAAAC 933 Query 48517 GTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAATGCTAATACATGTT 48576 |||| ||||| | ||| || || ||||| ||| ||||| || |||| ||| || Sbjct 932 GTTCTAATAAATTTTGATTAACAATACCATCTGAAGCTGCAAAGAAAGCTAGCACAGTTT 873 Query 48577 TAATAAAATATTTTTCGTTGGAAGTCAGTTTA----TTC-CAGTCATTGATATCTTTTGA 48631 |||| ||| | || || | || ||||| ||| | ||||| |||||| | Sbjct 872 TAATGAAAAACTTCTCAT----CCTC-GTTTAAAGTTTCAAAATCATTAGCATCTTTAGT 818 Query 48632 TATATCTACTTCTTCAGCTGTCCAAAATGA-TGCCTCTGCTTTTTTATACAT 48682 | || | ||||||| | |||| |||||| || ||| ||||||||||| Sbjct 817 AAAGTCAATTTCTTCAACAGTCC-AAATGACAGCAGATGCCTTTTTATACAT 767 >seq1918 Length=2592 Score = 105 bits (116), Expect = 9e-18 Identities = 296/444 (67%), Gaps = 9/444 (2%) Strand=Plus/Plus Query 77684 AGATGCTAGATTACAAACTGCTACCTCATTAGCGTTGGCATATTGTATTATCTCGGTACA 77743 |||||| || |||||||| || || | | || | | | ||||| || || || | ||| Sbjct 385 AGATGCAAGGTTACAAACAGCAACATTAGTACCATCTGAATATTCAATAATTTCAGCACA 444 Query 77744 TAGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTC 77803 | |||| || ||| || || || ||||| | ||| || | ||||| | || Sbjct 445 CAAATTAGAACTTTTAATTGTTCCAAGATTCTTTTGATTAGATAATCTATTGGCAGTATC 504 Query 77804 CTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGAC 77863 ||||||||| || | ||||| || ||||| || |||| | || || | | |||| | Sbjct 505 CTTATAAAGCATGTAAGGAGTACCAGTTTCTATTTGTGCTGTTATTATTGCTCTCCAAAG 564 Query 77864 GACTCTAGCTTTTATCATAGATTTGTATCGCCTCTCTCTT-TCATATTGAGTATATAGCC 77922 |||||| | || || | ||| || | || | | || ||||| ||| ||||| Sbjct 565 ATTTCTAGC-TCTAACA-ACCTTTCTA--GACTTTGTTTTCTCATAGTGATGATATAATG 620 Query 77923 GTTCAAATTCATCTCCCCAAACATCATCCAAT-CCAGGGCATTCATTTGG-GCACATCAA 77980 || |||||||| || || |||| ||| || ||| |||| || || || || Sbjct 621 ATTTAAATTCATTACCATGCACTTCATGTAATCCCTTAGCA-ACATTAGGATCAAAT-AA 678 Query 77981 TGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAAT 78040 ||| ||| |||||| | ||||| || |||||| | |||||||||||| ||||| | Sbjct 679 ACTCCATTCATCATCTTTTTCAACTCTTTCCATAAATAAATCAGGTATCCAAAGAGCTAA 738 Query 78041 AAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTC 78100 ||| | |||| | | || |||| || |||||||| | | ||| | ||| || Sbjct 739 AAACATTTCTCTAGCACGCATATCCTCATCACCAGTATTCTTCCTTAAATCTAAAAATTC 798 Query 78101 CATAATATCAGAATGCCATGGTTC 78124 | |||||| |||||||||||| Sbjct 799 AAAAATATCTTTATGCCATGGTTC 822 >seq672 Length=876 Score = 93.3 bits (102), Expect = 6e-14 Identities = 296/446 (66%), Gaps = 11/446 (2%) Strand=Plus/Minus Query 77685 GATGCTAGATTACAAACTGCTACCTCATTAGCGTTGGCATATTGTATTATCTCGGTACAT 77744 |||| || |||||||| || |||||| | | ||| | ||||| || | |||| Sbjct 509 GATGAAAGGTTACAAACAGCCGTTTCATTATTATCTGAATACTCAATTATTTCAGCACAT 450 Query 77745 AGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATT-GCATGAGTC 77803 | |||| || ||| ||||| || ||||| | ||| || | |||| ||| | || Sbjct 449 AAATTAGAACTTTTAATAGTTCCAAGATTCTTTTGATTTGATAATCTATTAGCAGTA-TC 391 Query 77804 CTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGAC 77863 ||||||||| || | ||||| || ||||| || |||| | || || | | |||| | Sbjct 390 CTTATAAAGCATGTAAGGAGTACCAGTTTCTATTTGTGCTGTTATTATTGCTCTCCAAAG 331 Query 77864 GACTCTAGCTTTTATCATAGATTTGTATCGCCTCTCTCTT-TCATATTGAGTATATAGCC 77922 ||||||| | | || | ||| || | || | | || ||||| ||| ||||| Sbjct 330 ATTTCTAGCTCTAA-CA-ACCTTTCTA--GACTTTGTTTTCTCATAGTGATGATATAATG 275 Query 77923 GTTCAAATTCATCTCCCCAAACATCATCCAATCCAGG-GCATTCATTTGGG-CACATCAA 77980 || |||||||| || | || |||| ||||| ||| |||| || || || || Sbjct 274 ATTTAAATTCATTACCATACACTTCATGTAATCCCTTAGCAA-CATTAGGATCAAATAAA 216 Query 77981 TGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAAT 78040 ||| | | |||||| | ||||| || |||||| | |||||||||||| ||||| | Sbjct 215 CT-CCATTAATCATCTTTTTCAACTCTTTCCATAAATAAATCAGGTATCCAAAGAGCTAA 157 Query 78041 AAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTC 78100 ||| | |||| | | || |||| || |||||||| | | ||| | ||| || Sbjct 156 AAACATTTCTCTAGCACGCATATCCTCATCACCAGTATTCTTCCTTAAATCTAAAAATTC 97 Query 78101 CATAATATCAGAATGCCATGGTTCTA 78126 | || || |||||| ||||||| Sbjct 96 AAAAACGTCTTTATGCCAAGGTTCTA 71 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694648446204160