Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hepatospora_20eriocheir_20[genbank_20GCA_5F002087875.1_202017-04-12]
2,344 sequences; 4,834,792 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq1858 170 3e-37
seq1918 105 9e-18
seq672 93.3 6e-14
>seq1858
Length=2805
Score = 170 bits (188), Expect = 3e-37
Identities = 548/832 (66%), Gaps = 44/832 (5%)
Strand=Plus/Minus
Query 47870 TTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTCCATAAAATCAAATGGATT 47929
|||||| || ||||||||||| |||| |||||| || || |||||||||| ||||| ||
Sbjct 1573 TTTCTCAAAGAAATTAGTTTTACCTTGCAATGAAATGTTGTCCATAAAATGGAATGGGTT 1514
Query 47930 AACTGCATTATAAAtttttttAAATCCTAATTCTGAAATCAGTCTATCTGCAACGAATTC 47989
| || |||||||| |||||||| ||| | |||||| |||| |||||
Sbjct 1513 TGGAGTGTTGTAAATTTTAGACTCACCTAATTCATAAAGTAATCTATCAGCAATAAATTC 1454
Query 47990 TATATATCTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGTAGAGCCTCCGT 48049
|| || |||| || | |||||| || || | ||| || |||| |||||| |
Sbjct 1453 AATGTACTCACTCATTTGTTTAGCATTCATCCCAATTAATTTTACAGGTAAAGCCTCAGC 1394
Query 48050 AAGAAACTCTTGTTCGATAGTGACAGCATC-----CACTATTATCGATGTTACCGT--TT 48102
|| ||| |||| ||| || || || || || ||| | |||| || || ||
Sbjct 1393 AAAAAATTCTTTTTCTATTTCAACTGCTTCACGGACAATATCTTTAATGT-ACGGTGATT 1335
Query 48103 CCTCACTTGGTGGATACAACAAATGTTTAAACATTAAACATGCAAAATCACAATGAAGAC 48162
||| || |||| | | || || |||| ||||||||| ||| | ||
Sbjct 1334 TCTCTCTGAA---ATAC------TCGTGAAGCA---AACAAGCAAAATCAGTATGCAAAC 1287
Query 48163 CTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTT 48222
||||||| || ||| | ||| ||||||||||| ||| | || | | || | |||||
Sbjct 1286 CTTCATCCCTTGAAATAAGTTCATTAGAAAATGTAAGAGCAGGAAGAATACCTCTTTTTT 1227
Query 48223 TGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATG 48282
| | |||||||||||| || |||||||| ||||||||||| ||||| || |||||||
Sbjct 1226 TCAACCAAAATATTGCAGCAAAAGATCCTGAAAAGAATATACCTTCAACACAAGCAAATG 1167
Query 48283 CGGTAAGTCTCTCTCCGTAACTGGCTTCGTTG--TGTATCCACCGTTGTGCCCAATCAGC 48340
| | | ||| | |||| || ||| || ||||| | |||||||||||
Sbjct 1166 CAATCATTCTAGTATCAAAACT--CTCATTTGAATGAATCCATTTAAGAGCCCAATCAGC 1109
Query 48341 CTTCTTCTTTACACAAGG-CATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATTGC 48399
||| ||||| | | |||| | || ||| ||| | ||||| | || | | |||
Sbjct 1108 CTTTTTCTTAATAGAAGGATAATG-TTCAATACCGTTAAATAAAATATCCCTCTCACGAT 1050
Query 48400 TATCTTTAACGTAAGTATCTATTAA--AAGACTATACATTTCGGAGTGAATATTTTCAAT 48457
||| || | ||| ||||| || ||| ||| | || |||| |||||||||
Sbjct 1049 CATCCTTGATAAGAGTTTCTATCAACTTAGAGTAT--GTCTCATTATGAACATTTTCAAT 992
Query 48458 TG-CCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTACCTCCGTACAAAATC 48516
| ||| || || | ||||| | || ||||| || || | || || ||| |
Sbjct 991 AGAACAT-TGTAAACTATAAAATGACTTCACTTCTAACATGTGAATTTCATTAGTAAAAC 933
Query 48517 GTTCAGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAATGCTAATACATGTT 48576
|||| ||||| | ||| || || ||||| ||| ||||| || |||| ||| ||
Sbjct 932 GTTCTAATAAATTTTGATTAACAATACCATCTGAAGCTGCAAAGAAAGCTAGCACAGTTT 873
Query 48577 TAATAAAATATTTTTCGTTGGAAGTCAGTTTA----TTC-CAGTCATTGATATCTTTTGA 48631
|||| ||| | || || | || ||||| ||| | ||||| |||||| |
Sbjct 872 TAATGAAAAACTTCTCAT----CCTC-GTTTAAAGTTTCAAAATCATTAGCATCTTTAGT 818
Query 48632 TATATCTACTTCTTCAGCTGTCCAAAATGA-TGCCTCTGCTTTTTTATACAT 48682
| || | ||||||| | |||| |||||| || ||| |||||||||||
Sbjct 817 AAAGTCAATTTCTTCAACAGTCC-AAATGACAGCAGATGCCTTTTTATACAT 767
>seq1918
Length=2592
Score = 105 bits (116), Expect = 9e-18
Identities = 296/444 (67%), Gaps = 9/444 (2%)
Strand=Plus/Plus
Query 77684 AGATGCTAGATTACAAACTGCTACCTCATTAGCGTTGGCATATTGTATTATCTCGGTACA 77743
|||||| || |||||||| || || | | || | | | ||||| || || || | |||
Sbjct 385 AGATGCAAGGTTACAAACAGCAACATTAGTACCATCTGAATATTCAATAATTTCAGCACA 444
Query 77744 TAGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTC 77803
| |||| || ||| || || || ||||| | ||| || | ||||| | ||
Sbjct 445 CAAATTAGAACTTTTAATTGTTCCAAGATTCTTTTGATTAGATAATCTATTGGCAGTATC 504
Query 77804 CTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGAC 77863
||||||||| || | ||||| || ||||| || |||| | || || | | |||| |
Sbjct 505 CTTATAAAGCATGTAAGGAGTACCAGTTTCTATTTGTGCTGTTATTATTGCTCTCCAAAG 564
Query 77864 GACTCTAGCTTTTATCATAGATTTGTATCGCCTCTCTCTT-TCATATTGAGTATATAGCC 77922
|||||| | || || | ||| || | || | | || ||||| ||| |||||
Sbjct 565 ATTTCTAGC-TCTAACA-ACCTTTCTA--GACTTTGTTTTCTCATAGTGATGATATAATG 620
Query 77923 GTTCAAATTCATCTCCCCAAACATCATCCAAT-CCAGGGCATTCATTTGG-GCACATCAA 77980
|| |||||||| || || |||| ||| || ||| |||| || || || ||
Sbjct 621 ATTTAAATTCATTACCATGCACTTCATGTAATCCCTTAGCA-ACATTAGGATCAAAT-AA 678
Query 77981 TGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAAT 78040
||| ||| |||||| | ||||| || |||||| | |||||||||||| ||||| |
Sbjct 679 ACTCCATTCATCATCTTTTTCAACTCTTTCCATAAATAAATCAGGTATCCAAAGAGCTAA 738
Query 78041 AAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTC 78100
||| | |||| | | || |||| || |||||||| | | ||| | ||| ||
Sbjct 739 AAACATTTCTCTAGCACGCATATCCTCATCACCAGTATTCTTCCTTAAATCTAAAAATTC 798
Query 78101 CATAATATCAGAATGCCATGGTTC 78124
| |||||| ||||||||||||
Sbjct 799 AAAAATATCTTTATGCCATGGTTC 822
>seq672
Length=876
Score = 93.3 bits (102), Expect = 6e-14
Identities = 296/446 (66%), Gaps = 11/446 (2%)
Strand=Plus/Minus
Query 77685 GATGCTAGATTACAAACTGCTACCTCATTAGCGTTGGCATATTGTATTATCTCGGTACAT 77744
|||| || |||||||| || |||||| | | ||| | ||||| || | ||||
Sbjct 509 GATGAAAGGTTACAAACAGCCGTTTCATTATTATCTGAATACTCAATTATTTCAGCACAT 450
Query 77745 AGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATT-GCATGAGTC 77803
| |||| || ||| ||||| || ||||| | ||| || | |||| ||| | ||
Sbjct 449 AAATTAGAACTTTTAATAGTTCCAAGATTCTTTTGATTTGATAATCTATTAGCAGTA-TC 391
Query 77804 CTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGAC 77863
||||||||| || | ||||| || ||||| || |||| | || || | | |||| |
Sbjct 390 CTTATAAAGCATGTAAGGAGTACCAGTTTCTATTTGTGCTGTTATTATTGCTCTCCAAAG 331
Query 77864 GACTCTAGCTTTTATCATAGATTTGTATCGCCTCTCTCTT-TCATATTGAGTATATAGCC 77922
||||||| | | || | ||| || | || | | || ||||| ||| |||||
Sbjct 330 ATTTCTAGCTCTAA-CA-ACCTTTCTA--GACTTTGTTTTCTCATAGTGATGATATAATG 275
Query 77923 GTTCAAATTCATCTCCCCAAACATCATCCAATCCAGG-GCATTCATTTGGG-CACATCAA 77980
|| |||||||| || | || |||| ||||| ||| |||| || || || ||
Sbjct 274 ATTTAAATTCATTACCATACACTTCATGTAATCCCTTAGCAA-CATTAGGATCAAATAAA 216
Query 77981 TGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAAT 78040
||| | | |||||| | ||||| || |||||| | |||||||||||| ||||| |
Sbjct 215 CT-CCATTAATCATCTTTTTCAACTCTTTCCATAAATAAATCAGGTATCCAAAGAGCTAA 157
Query 78041 AAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTC 78100
||| | |||| | | || |||| || |||||||| | | ||| | ||| ||
Sbjct 156 AAACATTTCTCTAGCACGCATATCCTCATCACCAGTATTCTTCCTTAAATCTAAAAATTC 97
Query 78101 CATAATATCAGAATGCCATGGTTCTA 78126
| || || |||||| |||||||
Sbjct 96 AAAAACGTCTTTATGCCAAGGTTCTA 71
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694648446204160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |