Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hepatospora_20eriocheir_20[genbank_20GCA_5F002087875.1_202017-04-12] 2,344 sequences; 4,834,792 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq1858 203 5e-47 seq2081 100 4e-16 >seq1858 Length=2805 Score = 203 bits (224), Expect = 5e-47 Identities = 571/857 (67%), Gaps = 40/857 (5%) Strand=Plus/Minus Query 46359 TTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTCCATAAAATCAAACGGATT 46418 |||||| || ||||||||||| |||| |||||| || || |||||||||| || || || Sbjct 1573 TTTCTCAAAGAAATTAGTTTTACCTTGCAATGAAATGTTGTCCATAAAATGGAATGGGTT 1514 Query 46419 AGTAACATTATAAAtttttttAAATCCTAATTCTGAAATCAGTCTATCTGCAACGAATTC 46478 | | || |||||||| |||||||| ||| | |||||| |||| ||||| Sbjct 1513 TGGAGTGTTGTAAATTTTAGACTCACCTAATTCATAAAGTAATCTATCAGCAATAAATTC 1454 Query 46479 TATATACGTTTTCATCATTTCACAATTCATTCCTATGAGTTTGACCGGTAGAGCCTCCGT 46538 || ||| |||| || | |||||| || || | ||| || |||| |||||| | Sbjct 1453 AATGTACTCACTCATTTGTTTAGCATTCATCCCAATTAATTTTACAGGTAAAGCCTCAGC 1394 Query 46539 AAGAAACTCTTGTTCAATAGTGACAGCATCC--GATATTATCG---ATGTTACTGT--TT 46591 || ||| |||| ||| || || || || || | |||| |||| || || || Sbjct 1393 AAAAAATTCTTTTTCTATTTCAACTGCTTCACGGACAATATCTTTAATGT-ACGGTGATT 1335 Query 46592 CCTCACTTGGTGGATGCATCAAATGTTTAAACATTAAACATGCAAAATCACAATGAAGGC 46651 ||| || || || | | | || || |||| ||||||||| ||| | | Sbjct 1334 TCTCTCT-----GAA--AT--ACTCGTGAAGCA---AACAAGCAAAATCAGTATGCAAAC 1287 Query 46652 CTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTT 46711 ||||||| || ||| | ||| ||||||||||| || |||| | | || | |||| Sbjct 1286 CTTCATCCCTTGAAATAAGTTCATTAGAAAATGTAAGAGCAGGAAGAATACCTCTTTTTT 1227 Query 46712 TGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATG 46771 | | ||||||||| || || |||||||| ||||||||||| ||||| ||| || |||| Sbjct 1226 TCAACCAAAATATTGCAGCAAAAGATCCTGAAAAGAATATACCTTCAACACAAGCAAATG 1167 Query 46772 CGACAAGTCTCTCTCCGTAACTGGCATCATTATGAATCCACCTTTGAGCCCAATCAGCCT 46831 | | | ||| | |||| ||| ||||||||| | ||||||||||||||| Sbjct 1166 CAATCATTCTAGTATCAAAACTCTCATTTGAATGAATCCATTTAAGAGCCCAATCAGCCT 1107 Query 46832 TTTTCTTTACACAAGG-CATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATCACTA 46890 ||||||| | | |||| | || ||| ||| | ||||| | || | | ||| | | Sbjct 1106 TTTTCTTAATAGAAGGATAATG-TTCAATACCGTTAAATAAAATATCCCTCTCACGATCA 1048 Query 46891 TCTTTAACATATGTATCTATTAA--AAGACTATACATTTCTGAATGAATGTTTTCAATAG 46948 || || | | || ||||| || ||| ||| | || ||||| |||||||||| Sbjct 1047 TCCTTGATAAGAGTTTCTATCAACTTAGAGTAT--GTCTCATTATGAACATTTTCAATAG 990 Query 46949 -CCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCTGTACAAAATCGT 47007 ||| || || | ||||| | | |||| || || | || || ||| ||| Sbjct 989 AACAT-TGTAAACTATAAAATGACTTCACTTCTAACATGTGAATTTCATTAGTAAAACGT 931 Query 47008 TCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGCCAATACATGTTTA 47067 || | ||||| | ||| || || ||||| ||| ||||| || || | ||| |||| Sbjct 930 TCTAATAAATTTTGATTAACAATACCATCTGAAGCTGCAAAGAAAGCTAGCACAGTTTTA 871 Query 47068 ATAAAATATTTTTCATCGGTAGTCAGTTTA----TTC-CAGTCATTGATATCTTTTGATA 47122 || ||| | || ||||| || ||||| ||| | ||||| |||||| | | Sbjct 870 ATGAAAAACTTCTCATC----CTC-GTTTAAAGTTTCAAAATCATTAGCATCTTTAGTAA 816 Query 47123 TATCTACTTCTTCAGCTGTCCAGAATGAC-GCCTCTGCTTTTTTATACATATTCCATATA 47181 || | ||||||| | ||||| |||||| || ||| ||||||||||| ||| || Sbjct 815 AGTCAATTTCTTCAACAGTCCA-AATGACAGCAGATGCCTTTTTATACATCCCCCAAATC 757 Query 47182 TCACGATATTGGATCGG 47198 || || |||| || || Sbjct 756 TCTGGAAATTGAATTGG 740 >seq2081 Length=2078 Score = 100 bits (110), Expect = 4e-16 Identities = 294/446 (66%), Gaps = 9/446 (2%) Strand=Plus/Plus Query 76279 AGATGCTAGATTACAAACGGCTACCTCATTAGCATTGGCATATTGTATTATCTCCGTGCA 76338 ||||| || |||||||| || |||||| || | ||| | ||||| || | || Sbjct 408 AGATGAAAGGTTACAAACAGCCGTTTCATTATTATCTGAATACTCAATTATTTCAGCACA 467 Query 76339 TAGATTACTACACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTACATGAGTC 76398 || |||| || || || ||||||||||| | ||| || | | ||| | || Sbjct 468 TAAATTAGAACTTTTAATTGTTCCAAGATTCTTTTGATTTGATAATCTATTAGCAGTATC 527 Query 76399 CTTATAAAGAACAAACGGAGTTCCAGTTTCAATCTGTG--ATTCGATAATAGATTTCCAG 76456 ||||||||| | | | ||||| ||||| || || |||| ||| ||||| | | |||| Sbjct 528 CTTATAAAGCATATAAGGAGTACCAGTCTCTATTTGTGCCATT--ATAATTGCTCTCCAA 585 Query 76457 ACGACTCTAGCTTTTATTATAGATTTGTATCGCTTCTCTCTTTCATATTGTGTATATAAC 76516 | ||||||||| | || ||| | | ||| | |||||| || |||||| Sbjct 586 AGATTTCTAGCTTTCACAATT--TTTCT-TGACTTAGTTTTTTCATGATGATAATATAAT 642 Query 76517 CGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGA-CACATCAA 76575 || ||||||| || | || |||| || || | |||| ||| || || || Sbjct 643 GATTTGAATTCATTACCATACACTTCATGTAACCCCTTAGCAACATTAGGATCAAATAAA 702 Query 76576 TGACCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAAT 76635 ||| ||| | |||| | ||| | || |||||| | |||||||||||| ||||| Sbjct 703 CT-CCAATCAGCGTCTTTTTCAACTCTTTCCATAAATAAATCAGGTATCCAAAGAGCTGA 761 Query 76636 AAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTC 76695 ||||| |||| | | ||||||| || |||||||| | | ||||| || || Sbjct 762 AAATATTTCTCTAGCACGCATATCTTCATCACCAGTATTCTTCCTTAAATCTAAAAATTC 821 Query 76696 CATAATATCAGAATGCCATGGTTCTA 76721 | |||||| ||||||||||||| Sbjct 822 AAAAATATCTTCGTGCCATGGTTCTA 847 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712913511022080