Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hepatospora_20eriocheir_20[genbank_20GCA_5F002087875.1_202017-04-12] 2,344 sequences; 4,834,792 total letters Query= NC_031761.1 Length=131855 Score E Sequences producing significant alignments: (Bits) Value seq1869 89.7 4e-13 >seq1869 Length=2780 Score = 89.7 bits (98), Expect = 4e-13 Identities = 141/197 (72%), Gaps = 4/197 (2%) Strand=Plus/Minus Query 111097 AAAATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCC 111156 |||||||| |||||||| || || | || || ||||| ||||| | ||| || || Sbjct 1492 AAAATGCAGATTTTTGTAAAGACACTTACAGGAAAAACAATTACATTAGAATTAGATCC- 1434 Query 111157 AGC-GATTCTGTTG-GCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCG 111214 ||| ||| || ||| | | | |||| | |||| || ||||||||||| |||| | Sbjct 1433 AGCAGATACTATTGAGACTGTTAAAGCGAAAA-TTCAAGACAAAGAAGGTATTCCTCCAG 1375 Query 111215 ATCAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATT 111274 | ||||| || ||||| | |||||| |||||| | |||||| | |||| || |||| Sbjct 1374 ACCAACAGAGACTTATATTTGCGGGAAAACAACTAGAAGATGGAAGAACTCTGAGTGATT 1315 Query 111275 ATAATATACAAAAAGAA 111291 | || ||||| || ||| Sbjct 1314 ACAACATACAGAAGGAA 1298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421799149908544