Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hepatospora_20eriocheir_20[genbank_20GCA_5F002087875.1_202017-04-12] 2,344 sequences; 4,834,792 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq1858 185 9e-42 >seq1858 Length=2805 Score = 185 bits (204), Expect = 9e-42 Identities = 581/885 (66%), Gaps = 44/885 (5%) Strand=Plus/Minus Query 23160 TTAAAAATCTTCATCTAAAGTGAATTT--CACTGCTTTATCACTATTCATAACACCCATT 23217 ||||||||||||||| | ||| || || || || ||| || ||| || | | | | Sbjct 1648 TTAAAAATCTTCATCAAGAGTAAAGTTATCATTGTTTT--CA-TATCCAACAAAAC--TC 1594 Query 23218 TTTTGATATTCCCCAACACGTCTTTCGAAAAAATTTGTCTTACCCTCTAATGATATATTT 23277 |||||||| | | | | | || || ||||| || ||||| | ||||| || || Sbjct 1593 TTTTGATAATTAGCTTCTTTTTTCTCAAAGAAATTAGTTTTACCTTGCAATGAAATGTTG 1534 Query 23278 TCCATAAAATCAAATGGATTAGAAGTATTATATACAGCTTTACA-TGA--TAATTCCTTT 23334 |||||||||| ||||| || | ||| || || | |||| | | | |||||| | Sbjct 1533 TCCATAAAATGGAATGGGTTTGGAGTGTTGTAAAT---TTTAGACTCACCTAATTCATAA 1477 Query 23335 AAAAGCCTATCTGCTACAAATTCAATATATTGACACATCAAATCATAGTTTATACCTATT 23394 | | ||||| || | ||||||||| || | || ||| | | || || || ||| Sbjct 1476 AGTAATCTATCAGCAATAAATTCAATGTACTCACTCATTTGTTTAGCATTCATCCCAATT 1417 Query 23395 AGTTTTACTGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAACAGCATCTTTAATT 23454 | |||||| || | || ||| || ||| |||||| || ||| || || Sbjct 1416 AATTTTACAGGTAAAGCCTCAGCAAAAAATTCTTTTTCTATTTCAACTGCTTCAC----- 1362 Query 23455 ATTTGAACAATAACTTCTTCACTAGGTGGATATTTT----AAATACTTAAACAATAAACA 23510 | |||||| ||| | || | ||| | | ||||||| | ||||| Sbjct 1361 ----GGACAATATCTT-TAATGTACGGTGATTTCTCTCTGAAATACTCGTGAAGCAAACA 1307 Query 23511 TGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCC 23570 ||||||||| ||| | ||||||||||| ||| | ||||||||||||||| | | Sbjct 1306 AGCAAAATCAGTATGCAAACCTTCATCCCTTGAAATAAGTTCATTAGAAAATGTAAGAGC 1247 Query 23571 TGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAAT 23630 || | | |||| |||||| | |||||||||||||||||| ||||| |||||||| || Sbjct 1246 AGGAAGAATACCTCTTTTTTTCAACCAAAATATTGCAGCAAAAGATCCTGAAAAGAATAT 1187 Query 23631 ACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGAAAT 23690 ||| |||||| ||||| || | | | ||| |||| | |||| ||| ||| Sbjct 1186 ACCTTCAACACAAGCAAATGCAATCATTCTAGTATCAAAACTCTCATTTGAAT---GAAT 1130 Query 23691 CCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCA-ATTGTTTCAATTGCTTTTA 23749 |||||| | ||||| |||||| || | | | | | || |||||| | || | Sbjct 1129 CCATTTAAGAGCCCAATCAGCCTTTTTCTTAATAGAAGGATAATG-TTCAATACCGTTAA 1071 Query 23750 AGAGAAAAGTTTTTTCTTCATTATCTGTTATA----TATGTATCAATTAGTAAACTATAC 23805 | | || | | || || ||| | ||| | | |||||| | || | ||| Sbjct 1070 ATAAAATATCCCTCTCACGATCATCCTTGATAAGAGTTTCTATCAACT--TAGAGTAT-- 1015 Query 23806 ATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGAC 23865 | ||| ||||| ||||||||||| | || || | |||||| | | |||| || Sbjct 1014 GTCTCATTATGAACATTTTCAATAGAACATTGTAAACTATAAAATGACTTCACTTCTAAC 955 Query 23866 AATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCA 23925 | |||| |||||| ||| | || |||||||| |||||||||||||| ||| Sbjct 954 ATGTGAATTTCATTAGTAAAACGTTCTAATAAATTTTGATTAACAATACCATCTGAAGCT 895 Query 23926 GCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATC--AGTTGATAATTTTTTCC 23983 ||||||||||| || ||| ||| || ||| | ||||| ||| ||| ||| Sbjct 894 GCAAAGAAAGCTAGCACAGTTTTAATGAAAAACTTCTCATCCTCGTT--TAAAGTTTCAA 837 Query 23984 AATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAA 24028 |||||||| |||||| | || |||| ||| ||||| ||||||| Sbjct 836 AATCATTAGCATCTTTAGTAAAGTCAATTTCTTCAACAGTCCAAA 792 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521472720401600