Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hepatospora_20eriocheir_20[genbank_20GCA_5F002087875.1_202017-04-12] 2,344 sequences; 4,834,792 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq1869 84.2 2e-11 >seq1869 Length=2780 Score = 84.2 bits (92), Expect = 2e-11 Identities = 153/219 (70%), Gaps = 4/219 (2%) Strand=Plus/Plus Query 41650 TAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTC 41709 ||| || ||||||| || || |||||||| ||||| || || || || | | || Sbjct 1277 TAAAACAAGATGCAAAGTACTTTCCTTCTGTATGTTGTAATCACTCAGAGTTCTTCCATC 1336 Query 41710 GTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTC 41769 || || || || || || ||||| || | ||||||||| | |||| | || ||||| Sbjct 1337 TTCTAGTTGTTTTCCCGCAAATATAAGTCTCTGTTGGTCTGGAGGAATACCTTCTTTGTC 1396 Query 41770 CATGATTTTTTGCTTCAAC-GACGACACAGTGTC-GCTCGACTCCACCTCCACCGTTATC 41827 ||| |||| |||| ||| | | | ||| || ||| || || | || | || || Sbjct 1397 T-TGAATTTTCGCTTTAACAGTCTCAATAGTATCTGCTGGA-TCTAATTCTAATGTAATT 1454 Query 41828 GTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTTA 41866 ||||| || || || |||||||| ||||||||||| ||| Sbjct 1455 GTTTTTCCTGTAAGTGTCTTTACAAAAATCTGCATTTTA 1493 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462290454492800