Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hepatospora_20eriocheir_20[genbank_20GCA_5F002087885.1_202017-04-12] 1,300 sequences; 4,570,278 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq1043 113 5e-20 >seq1043 Length=1839 Score = 113 bits (124), Expect = 5e-20 Identities = 376/575 (65%), Gaps = 10/575 (2%) Strand=Plus/Minus Query 24134 ACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAG 24193 ||| || ||||| || | ||| || || || ||| | ||| || ||||| || || Sbjct 1839 ACAAGCAAAATCAGTATGCAAACCTTCATCCCTTGAAATAAGTTCATTAGAAAATGTAAG 1780 Query 24194 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAA 24253 | || | | || | ||||| | ||||||||| | ||||| ||||| |||||||| Sbjct 1779 AGCAGGAAGAATACCTCTTTTTTTCAACCAAAATATTGCAGCAAAAGATCCTGAAAAGAA 1720 Query 24254 AATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGGCGCTGTCATGTAT 24313 || ||||| || ||||| ||||| | ||| || ||| | | ||| || Sbjct 1719 TATACCTTCAACACAAGCAAATGCAATCATTCTAGTATCAAAACTCTCATTTGAATGAAT 1660 Query 24314 CCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGC-ATTGTCTCTATAGCATTAA 24372 ||| || |||||||||| ||||| || || | | |||| | ||| || ||| | |||| Sbjct 1659 CCATTTAAGAGCCCAATCAGCCTTTTTCTTAATAGAAGGATAATGT-TCAATACCGTTAA 1601 Query 24373 AGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAA--AGACTATACAT 24430 | | | | | ||| | ||| || | | || || ||||| ||| ||| | Sbjct 1600 ATAAAATATCCCTCTCACGATCATCCTTGATAAGAGTTTCTATCAACTTAGAGTATG--T 1543 Query 24431 TTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAAT 24490 || ||||| |||||||| | ||| || | || || | | | || || Sbjct 1542 CTCATTATGAACATTTTCAATAGAACATTGTAAACTATAAAATGACTTCACTTCTAACAT 1483 Query 24491 CTGTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGC 24550 || | ||| || ||| |||||| |||||||| ||| || || || || |||||| Sbjct 1482 GTGAATTTCATTAGTAAAACGTTCTAATAAATTTTGATTAACAATACCATCTGAGGCTGC 1423 Query 24551 AAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTC-TGGTGTTAGTTTATTCCAAT 24609 ||| || || || ||| ||| || ||| | || || || | || | | || | ||| Sbjct 1422 AAAGAAAGCTAACACAGTTTTAATGAAAAACTTCTCATCCTCGTTTAAAGTT-TCAAAAT 1364 Query 24610 CATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGAT-GCCTCTGCCTTT 24668 |||| |||||||| | || | |||||| || ||||||| ||| || ||||||| Sbjct 1363 CATTAGCATCTTTAGTAAAGTCAATTTCTTCAACAGTCCAAA-TGACAGCAGATGCCTTT 1305 Query 24669 TTATACATATTCCAGATGTCATGATATTGAATTGG 24703 |||||||| ||| || || || |||||||||| Sbjct 1304 TTATACATCCCCCAAATCTCTGGAAATTGAATTGG 1270 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593711952024000