Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hepatospora_20eriocheir_20[genbank_20GCA_5F002087885.1_202017-04-12] 1,300 sequences; 4,570,278 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq1221 86.0 1e-11 >seq1221 Length=19326 Score = 86.0 bits (94), Expect = 1e-11 Identities = 196/290 (68%), Gaps = 5/290 (2%) Strand=Plus/Minus Query 189417 AACAACTCGAAAAAGCGGAAACTCATGATCCTCTATGGAACGCGTCACAAATGCAGATGG 189476 ||||||| ||| | ||||| || ||| ||||||| || | ||| || |||| Sbjct 8428 AACAACTTAGAAATGGAGAAACACAAGATGAATTATGGAATGCAGCTCAACATCAAATGG 8369 Query 189477 TGAGAGAAGGAAAAATGCATAGTTTTTTACGAATGTATTGGGCTAAGAAGATACTTGAAT 189536 | ||||| || ||||||||| ||| || |||||||||||||||| || || || | Sbjct 8368 TAAGAGAGGGTAAAATGCATGGTTATTGTAGAATGTATTGGGCTAA-AACATTATTAAGG 8310 Query 189537 GGACTAGAACACCTGAAGACGCTTTGAGTTATAG-TATCTATTTGAACAACAAGTACGAA 189595 | | || ||| |||| ||||| | |||| || | || || | |||| || Sbjct 8309 TGGTTTGA--ACCAAAAGAAGCTTT-AAAAATAGCAATAGAATTTAATGATGAGTATCAA 8253 Query 189596 CTAGACGGCACGGATCCTAACGGATACGTAGGTTGTATGTGGTCTATTTGCGGATTACAC 189655 | || || | |||||||| ||||| ||| ||||||| |||||| || | | Sbjct 8252 ATGGATGGAAATGATCCTAATGGATATACAGGAATTATGTGGAGTATTTGTGGTTCAATG 8193 Query 189656 GATAGAGCGTGGAAAGAAAGACCGATATTTGGAAAGATAAGATATATGAA 189705 |||||||| | ||||||| | | ||||| || ||||||| ||||| Sbjct 8192 GATAGAGCTTTTAAAGAAAAAGAATTCTTTGGGAAAATAAGATCAATGAA 8143 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 923181798052000