Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hepatospora_20eriocheir_20[genbank_20GCA_5F002087885.1_202017-04-12] 1,300 sequences; 4,570,278 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq1262 141 7e-29 >seq1262 Length=14089 Score = 141 bits (156), Expect = 7e-29 Identities = 176/236 (75%), Gaps = 4/236 (2%) Strand=Plus/Minus Query 15133 TCTGCCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATC 15192 ||| |||||||| | ||||||||| | ||| | || || || |||||||||||||| Sbjct 4525 TCTACCACCTCTAAGTCTTAAAACAAGATGCAAAGTACTTTCCTTCTGTATGTTGTAATC 4466 Query 15193 GCTTAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTT 15252 || ||| |||| | ||||||| |||||| || || |||| | | |||||||| Sbjct 4465 ACTCAGAGTTCTTCCATCTTCTAGTTGTTTTCCCGCAAATATAAGTCTCTGTTGGTCTGG 4406 Query 15253 TGGAATTCCTTCTTTGTCACAAATTTTGCTCTTTA-CAATTTCTATGGTATC-GCTATTT 15310 ||||| ||||||||||| |||||| | ||||| || | || || ||||| ||| | Sbjct 4405 AGGAATACCTTCTTTGTCTTGAATTTT-CGCTTTAACAGTCTCAATAGTATCTGCTGGAT 4347 Query 15311 TCTACATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15366 ||| ||||| ||||| ||||| ||||| || || ||||||||||| ||||| || Sbjct 4346 -CTAATTCTAATGTAATTGTTTTTCCTGTAAGTGTCTTTACAAAAATCTGCATTTT 4292 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362173461723300