Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hepatospora_20eriocheir_20[genbank_20GCA_5F002087885.1_202017-04-12] 1,300 sequences; 4,570,278 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq1262 96.9 3e-15 >seq1262 Length=14089 Score = 96.9 bits (106), Expect = 3e-15 Identities = 155/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 18827 CTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCG 18886 ||||| || | ||||| ||| ||||| || || |||||||| || ||| | | Sbjct 4509 CTTAAAACAAGATGCAAAGTACTTTCCTTCTGTATGTTGTAATCACTCAGAGTTCTTCCA 4450 Query 18887 TCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTG 18946 || || || ||||| |||||| | ||||||||||| || || || | || |||||| Sbjct 4449 TCTTCTAGTTGTTTTCCCGCAAATATAAGTCTCTGTTGGTCTGGAGGAATACCTTCTTTG 4390 Query 18947 TCGGCAATTTTCTGTTTTACCTGGC-CGACAGTATCGCCAGGCTCCGTTTCGACGGTAAT 19005 || ||||||| | |||| | | | | | |||||| | || || ||| | ||||| Sbjct 4389 TCTTGAATTTTC-GCTTTAACAGTCTCAATAGTATCTGCTGGATCTAATTCTAATGTAAT 4331 Query 19006 GGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCATTTTA 19045 ||||| ||||| | || || |||||||| ||||||||| Sbjct 4330 TGTTTTTCCTGTAAGTGTCTTTACAAAAATCTGCATTTTA 4291 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414566231612200