Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hepatospora_20eriocheir_20[genbank_20GCA_5F002087885.1_202017-04-12]
1,300 sequences; 4,570,278 total letters
Query= NC_005179.1
Length=134721
Score E
Sequences producing significant alignments: (Bits) Value
seq746 122 8e-23
>seq746
Length=365
Score = 122 bits (134), Expect = 8e-23
Identities = 254/372 (68%), Gaps = 16/372 (4%)
Strand=Plus/Minus
Query 12860 TTTTGATA-TTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATT 12918
|||||||| || ||| || |||| ||||| || || ||||| |||| || ||||| ||
Sbjct 362 TTTTGATAATTAGCTT-CTTTTTTCTCAAAGAAATTAGTTTTACCTTGCAATGAAATGTT 304
Query 12919 TTCCATAAAATCGAAAGGATTTTTCGAACAATAGTATTTTTTACAC---CCTAATTCTAG 12975
|||||||||| ||| || ||| | | | ||| ||||| || ||||| ||
Sbjct 303 GTCCATAAAATGGAATGGGTTT---GGAGTGTTGTAAATTTTAGACTCACCTAACTCATA 247
Query 12976 TAACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTAT 13035
| ||||| ||||||| ||| || ||||||| ||||| | | ||||| || ||
Sbjct 246 AAGTAATCTATCAGCAATAAATTCAATGTACTCACTCATTTGTTTAGCATTCATCCCAAT 187
Query 13036 TAATTTTACAGGCATAGCTTCTGTTAAAAAGtttttttCTATATCAACTGCTTCGATAAC 13095
|||||||||||| | ||| || | ||||| | |||||||| ||||||||||| ||
Sbjct 186 TAATTTTACAGGTAAAGCCTCAGCAAAAAATTCCTTTTCTATTTCAACTGCTTCACGGAC 127
Query 13096 TATGTCTCTTAT-TACGTTCTCTAATGGAGGATTTGATAGATGCTTAAACATCATACATG 13154
|| ||| | || |||| | | | | ||| | | | | | | || ||| |
Sbjct 126 AATATCTTTAATGTACGGTGATTTCT-----CTCTGAAATACTCGTGA--AGCAAACAAG 74
Query 13155 CAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCCG 13214
|||||||| ||||| |||||||| || || || || || |||||||| ||| | |
Sbjct 73 CAAAATCAGTATGCAAACCTTCATCCCTTGAAATAAGTTCATTAGAAAATGTAAGAGCAG 14
Query 13215 GCATAAGCCCTC 13226
| | || ||||
Sbjct 13 GAAGAATACCTC 2
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430975571622600
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |