Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hepatospora_20eriocheir_20[genbank_20GCA_5F002087885.1_202017-04-12] 1,300 sequences; 4,570,278 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq130 172 7e-38 seq675 104 3e-17 >seq130 Length=45930 Score = 172 bits (190), Expect = 7e-38 Identities = 303/431 (70%), Gaps = 18/431 (4%) Strand=Plus/Minus Query 164512 CATATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATTAATGGCTCGA 164571 ||| | || |||||| | || |||| || ||||| ||||| || ||||| ||| || Sbjct 26523 CATGTTAAGGGAATTATGCTATATGGTCCACCTGGAACTGGTAAGACGTTAATTGCTAGA 26464 Query 164572 TGCATTGC-TCAAGCTTTTAAAT-CGCGACCCGTTAAAATTGTTAATGGTCCTGAATTAT 164629 | | ||| ||| | ||| | || | ||||||||||||||| |||||| | | Sbjct 26463 AAGTTAGGATCA--CTTCTGAATTCAAGAGCACCTAAAATTGTTAATGGACCTGAAATTT 26406 Query 164630 TGAACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTCAGGAGGCTGAAG 164689 | || || || || ||| | ||||||| ||| | ||||| || ||| |||||||| Sbjct 26405 TAAATAAGTACGTTGGTCAATCAGAAGAAAATATAAGAAATTTATTTGCTGAGGCTGAGA 26346 Query 164690 AAGAACAAAAGAAAGCAGGTTTAGCTAGTA-AATTACATGTTATTGTTTTTGATGAGATA 164748 | || | || || | ||| | | | | |||||||| | ||| |||||||||| ||| Sbjct 26345 ATGAGTATAA-AATGAAGGGTGATCGATCGCAATTACATATAATTATTTTTGATGAAATA 26287 Query 164749 GATGCTCTTTGCAAAAAACGTGGTGATAATATT-------ATTCATG-ATGCAGTGGTTA 164800 |||||| |||| ||||| | || || | ||| | || | || ||| |||| Sbjct 26286 GATGCTATTTGTAAAAAGAGAGG--ATCAGATTCCAGTGGAGTCGGGGATAAAGTAGTTA 26229 Query 164801 ATCAGTTGCTTTCTAAAATAGATGGTGTAGA-ATCCTTAAATAATATTTTAATTGTAGGT 164859 ||||||| | |||||| |||||||| || | ||||| ||||||||| | |||| Sbjct 26228 ATCAGTTATTAAGTAAAATTGATGGTGTTGATAGTCTTAA-TAATATTTTGGTGATAGGA 26170 Query 164860 ATGACCAACCGACCTGATTTAATTGATGATGCTTTATTACGACCTGGTCGATTAGAATTG 164919 ||||| || | | |||||||||||||||||| ||||| |||| ||| |||| ||| | Sbjct 26169 ATGACAAATAGGCTTGATTTAATTGATGATGCATTATTGAGACCGGGTAGATTTGAAATT 26110 Query 164920 AAAATAGAAAT 164930 ||| ||||||| Sbjct 26109 AAATTAGAAAT 26099 >seq675 Length=13674 Score = 104 bits (114), Expect = 3e-17 Identities = 128/175 (73%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 19329 TTAAAATTAAATTAAGATCTTCTAAAATACCTGAAATAGGTGATAAGTTTGCTTCTTTTA 19388 |||| ||||| ||||| || | ||||||||||| |||||||| ||||||||| Sbjct 11007 TTAAGGTTAAAATAAGAAGTTTAAGAATACCTGAAAGGGGTGATAAATTTGCTTCTAGAC 11066 Query 19389 CTGCTCAAAAAGGCACATGTGGTATGATTTATCGTCAAGAAGATATGCCTTTTACTAAAG 19448 |||||| ||||| ||| || || |||| |||||| |||||||| |||||| | Sbjct 11067 ATGCTCAGAAAGGAACAATAGGAATTATTTTAGATCAAGAGGATATGCCATTTACTGGTG 11126 Query 19449 ATGGTATAGTGCCGGATCTTATTATTAACCCACATGCTTTTCCAAGTCGAATGAC 19503 | ||||| | || || | |||||||| || |||||| | ||| ||| ||||| Sbjct 11127 AGGGTATCATTCCTGACATAATTATTAATCCTCATGCTATCCCATCTCGTATGAC 11181 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595862317080000