Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hepatospora_20eriocheir_20[genbank_20GCA_5F002087885.1_202017-04-12] 1,300 sequences; 4,570,278 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq580 113 1e-19 seq1043 111 4e-19 >seq580 Length=1103 Score = 113 bits (124), Expect = 1e-19 Identities = 158/219 (72%), Gaps = 6/219 (3%) Strand=Plus/Plus Query 22429 TCAATTAAGAATAAGGCAGATTGGGCGCTGAAATGGATGAAC---AATGAACGTTCATTC 22485 || |||||||| ||||| |||||||| || |||||||| | ||||| ||| || Sbjct 888 TCTATTAAGAAAAAGGCTGATTGGGCTCTTAAATGGATTCATTCAAATGAGAGTT--TTG 945 Query 22486 GCGGAACGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGT 22545 | | | | |||||||||||| |||||||| || |||||||| ||| | ||| | Sbjct 946 ACACTA-GAATGATTGCATTTGCTTGTGTTGAAGGTATATTCTTTTCAGGATCTTTTGCT 1004 Query 22546 GCAATCTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTA 22605 ||||| |||||||| ||||| | | ||| | || | ||| || ||||| ||||| | Sbjct 1005 GCAATATTTTGGCTGAAAAAGAGAGGTATTCTTCCTGCTCTTACATTTTCTAATGAACTT 1064 Query 22606 ATTAGCCGAGATGAGGGTCTTCATACCGATTTTGCGTGT 22644 ||| | ||||| ||| | ||||| |||||||| ||| Sbjct 1065 ATTTCAAGGGATGAAGGTTTGCATACTGATTTTGCTTGT 1103 >seq1043 Length=1839 Score = 111 bits (122), Expect = 4e-19 Identities = 158/221 (71%), Gaps = 10/221 (5%) Strand=Plus/Plus Query 22429 TCAATTAAGAATAAGGCAGATTGGGCGCTGAAATGGATGAAC---AATGAACGTTC--AT 22483 || |||||||| ||||| |||||||| || |||||||| | ||||| ||| || Sbjct 1624 TCTATTAAGAAAAAGGCTGATTGGGCTCTTAAATGGATTCATTCAAATGAGAGTTTTGAT 1683 Query 22484 TCGCGGAACGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTT 22543 | | | | |||||||||||| |||||||| || |||||||| ||| | ||| Sbjct 1684 ACTAGAA-----TGATTGCATTTGCTTGTGTTGAAGGTATATTCTTTTCAGGATCTTTTG 1738 Query 22544 GTGCAATCTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGT 22603 |||||| |||||| | |||||| | | ||| | || | ||| || ||||| ||||| Sbjct 1739 CTGCAATATTTTGGTTGAAAAAAAGAGGTATTCTTCCTGCTCTTACATTTTCTAATGAAC 1798 Query 22604 TAATTAGCCGAGATGAGGGTCTTCATACCGATTTTGCGTGT 22644 | ||| | ||||| ||| | ||||| |||||||| ||| Sbjct 1799 TTATTTCAAGGGATGAAGGTTTGCATACTGATTTTGCTTGT 1839 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303331891016600