Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hepatospora_20eriocheir_20[genbank_20GCA_5F002087885.1_202017-04-12] 1,300 sequences; 4,570,278 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq1262 107 2e-18 >seq1262 Length=14089 Score = 107 bits (118), Expect = 2e-18 Identities = 164/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 23988 AAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCC 24047 |||||||| | |||||||| ||| | || |||||| | ||||| | ||| | || || Sbjct 4292 AAAATGCAGATTTTTGTAAAGACACTTACAGGAAAAACAATTACATTAGAATTAGAT-CC 4350 Query 24048 AAC-GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGA 24106 | | || || || ||| || ||| || ||| ||||||||||| || ||||| || Sbjct 4351 AGCAGATACTATTGAGACTGTTAAAGCGAAAATTCAAGACAAAGAAGGTATTCCTCCAGA 4410 Query 24107 TCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTA 24166 ||||||||||| || | | || || ||||| ||||||| |||| | || ||||| Sbjct 4411 CCAACAGAGACTTATATTTGCGGGAAAACAACTAGAAGATGGAAGAACTCTGAGTGATTA 4470 Query 24167 TAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||||| || || ||| ||| | ||| | || |||||| | ||||| || Sbjct 4471 CAACATACAGAAGGAAAGTACTTTGCATCTTGTTTTAAGACTTAGAGGTGG 4521 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429929188201500