Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hepatospora_20eriocheir_20[genbank_20GCA_5F002087885.1_202017-04-12] 1,300 sequences; 4,570,278 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq1262 93.3 3e-14 >seq1262 Length=14089 Score = 93.3 bits (102), Expect = 3e-14 Identities = 139/195 (71%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 16745 TCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAA 16804 ||||| ||||||||||| || || ||| | | || || | |||||| |||||| | Sbjct 4485 TCCTTCTGTATGTTGTAATCACTCAGAGTTCTTCCATCTTCTAGTTGTTTTCCCGCAAAT 4426 Query 16805 ATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGG 16864 ||||| | ||||||||| ||| | || |||||||| ||||| | |||| | | | Sbjct 4425 ATAAGTCTCTGTTGGTCTGGAGGAATACCTTCTTTGTCTTGAATTTTC-GCTTTAACAGT 4367 Query 16865 C-CCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGAC 16923 | | | ||| || | || || ||| | || || |||||||| || || || || || Sbjct 4366 CTCAATAGTATCTGCTGGATCTAATTCTAATGTAATTGTTTTTCCTGTAAGTGTCTTTAC 4307 Query 16924 AAAAATCTGCATTTT 16938 ||||||||||||||| Sbjct 4306 AAAAATCTGCATTTT 4292 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405081581887000