Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hepatospora_20eriocheir_20[genbank_20GCA_5F002087885.1_202017-04-12] 1,300 sequences; 4,570,278 total letters Query= NC_008520.2 Length=132239 Score E Sequences producing significant alignments: (Bits) Value seq1262 89.7 4e-13 >seq1262 Length=14089 Score = 89.7 bits (98), Expect = 4e-13 Identities = 141/197 (72%), Gaps = 4/197 (2%) Strand=Plus/Plus Query 111184 AAAATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCC 111243 |||||||| |||||||| || || | || || ||||| ||||| | ||| || || Sbjct 4292 AAAATGCAGATTTTTGTAAAGACACTTACAGGAAAAACAATTACATTAGAATTAGATCC- 4350 Query 111244 AGC-GATTCTGTTG-GCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCG 111301 ||| ||| || ||| | | | |||| | |||| || ||||||||||| |||| | Sbjct 4351 AGCAGATACTATTGAGACTGTTAAAGCGAAAA-TTCAAGACAAAGAAGGTATTCCTCCAG 4409 Query 111302 ATCAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATT 111361 | ||||| || ||||| | |||||| |||||| | |||||| | |||| || |||| Sbjct 4410 ACCAACAGAGACTTATATTTGCGGGAAAACAACTAGAAGATGGAAGAACTCTGAGTGATT 4469 Query 111362 ATAATATACAAAAAGAA 111378 | || ||||| || ||| Sbjct 4470 ACAACATACAGAAGGAA 4486 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 423033297460000