Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hepatospora_20eriocheir_20[genbank_20GCA_5F002087885.1_202017-04-12] 1,300 sequences; 4,570,278 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq291 183 1e-40 seq675 170 8e-37 seq87 123 1e-22 seq1262 118 4e-21 seq2 118 4e-21 seq469 114 5e-20 seq519 95.1 5e-14 seq47 93.3 2e-13 >seq291 Length=15756 Score = 183 bits (202), Expect = 1e-40 Identities = 283/396 (71%), Gaps = 15/396 (4%) Strand=Plus/Plus Query 451321 TGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGC 451380 ||| || ||||||||||| || ||||| |||||| | || | |||||||| |||||||| Sbjct 8264 TGCTGTTATTACTGTTCCAGCATATTTTAATGATACTCAGAGACAAGCAACAAAAGATGC 8323 Query 451381 AGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCT 451440 || || | || |||| |||||| | |||||||||||||||| || ||||| ||| | Sbjct 8324 TGGTCAATTAGCAGGTTGGAATGTTTTGAGAATTATTAATGAACCAACGGCAGCCGCTTT 8383 Query 451441 AGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTT 451500 ||| |||||||| | | |||||| || |||| |||| ||| | |||||| Sbjct 8384 AGCTTATGGACT-------TGATAAGAAA-AG-AGAAGGTTATATAGCAGTTTATGATTT 8434 Query 451501 TGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAA 451560 || |||||||| ||||| |||| | | ||| ||||||| | ||| ||||||| Sbjct 8435 AGGAGGAGGAACATTTGATATTTCTATTTTGGAAATAAAAGATGGAATCTTTCAAGTAAA 8494 Query 451561 GGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAATGCAATTGTGGAATG 451620 |||| ||||| | ||| | ||||||| |||||| |||||| || | |||| ||| Sbjct 8495 ATCAACAAATGGAAACACTTTTTTAGGAGGAGAAGATTTTGATAGTGAATTTGTTAAATT 8554 Query 451621 GTT-GAAAACTGATG-TTCAACGAAAACTAAAAGTAGATATTTCTACTAACCAAAAAGCA 451678 || | |||| ||| |||| ||| | | |||||||||| |||| || |||| Sbjct 8555 TTTAGCAAAC--ATGTTTCATATGAAAGAAGGAATAGATATTTCATCTAATAAAGAAGCT 8612 Query 451679 CT-TAGACGTCTTAAAACATCAGCAGAAAAAGCTAA 451713 | | | || | |||| |||||| |||| |||||| Sbjct 8613 TTGAATAAGT-TGAAAATATCAGCTGAAATAGCTAA 8647 >seq675 Length=13674 Score = 170 bits (188), Expect = 8e-37 Identities = 481/721 (67%), Gaps = 22/721 (3%) Strand=Plus/Plus Query 248483 CTAAACATGGACAAAAAGGAACAGTTGGTATTACTTTGCCACAAAGAGATATGCCTTTCA 248542 ||| ||||| || ||||||||| | || |||| ||| ||| |||||||| || | Sbjct 11061 CTAGACATGCTCAGAAAGGAACAATAGGAATTATTTTAGATCAAGAGGATATGCCATTTA 11120 Query 248543 CATCAGAAGGTATGACTCCAGATTTAATTTTCAATCCACATGGTATGCCTACACGTATGA 248602 | || ||||| | ||| || ||||| | ||||| |||| ||| || | ||||||| Sbjct 11121 CTGGTGAGGGTATCATTCCTGACATAATTATTAATCCTCATGCTATCCCATCTCGTATGA 11180 Query 248603 CTATGGGACAATTAGCAGAAACACTTGC-ATCAAAAGCTGCAGCTAATATT-GGTGAATT 248660 |||| || || ||| |||| |||| | ||||| | ||| ||| |||||| Sbjct 11181 CTATTGGTCACTTATTAGAATG-CTTGTTAGGAAAAGTTAGTGCTT-TATCAGGTGAAGA 11238 Query 248661 ATTTGATGGAACACCTTTTTC-AGATTATGATGTTACCGAAATTCCTA--AAGTTCTAAA 248717 |||| ||||||||| | | | ||| || ||||| | | ||||| || Sbjct 11239 GGGAGATGCTACACCTTTTACTAAAGTATCG-GTAGAAGAAATATCAAGTAAGTT--AAG 11295 Query 248718 AGAATT-AGGAATGGATGAATATGGAACTGAAGAAATGTATTGTGGAATGACAGGGCGGA 248776 |||||| | || | || | |||| ||||| |||| | ||| ||||| || | Sbjct 11296 AGAATTCAATTATCAA-GACTGTGGATATGAAGTAATGCACAATGGTATGACTGGTTATA 11354 Query 248777 AAATGAAAGCTAGAATTTTCATTGGTCCTATGTTTTATTTGAGACTTAAACATATGGTAC 248836 || | |||||||| || || ||||| |||| | |||| ||| | |||||||||||| Sbjct 11355 AACTAAAAGCTAGTATCTTTATTGGACCTACTTATTATCAAAGATTAAAACATATGGTAG 11414 Query 248837 TTGATAAAGTTCATTCCAGAAGTATGGGTCCTAGACAAGCTATTACTAGACAACCCATGG 248896 ||||||| | ||| ||| | || || ||||| | || |||||||| | | Sbjct 11415 ATGATAAAATGCATGGTAGAGCAAGAGGACCATTACAAGTACTAACAAGACAACCTGTTG 11474 Query 248897 AAGGACGTTCTAAAGATGGAGGTCTTAAAATTGGAGAGATGGAAAAAGATGCAATGGTTG 248956 ||||| | || | ||||||||| | | | ||||||| ||||||| |||| ||| | Sbjct 11475 AAGGAAGGTCAAGAGATGGAGGATTAAGATTTGGAGAAATGGAAAGAGATTGTATGATCT 11534 Query 248957 CTCATGG-AATAGGACAATTCTTAAAAGAACGAATGATGGAAAATTCTGATATAACCAC- 249014 ||||||| | | || ||||| ||||| || | | || ||||||| | ||| Sbjct 11535 CTCATGGTACTGCTGCATTTCTT-AAAGAGAGACTTTTAGATGTCTCTGATACATACACT 11593 Query 249015 AATAATGGTTTGTGATAAATGTGGAACTTTTGCTACTAAAGTTATGGACAAAGAATATTA 249074 | || |||||| | | |||||| ||||||| || | |||| | ||| Sbjct 11594 GCTTAT-GTTTGTAACAGTTGTGGATTGTTTGCTA------TTGCTGGTGAAGATTTTTA 11646 Query 249075 TGTTTGTAATAACTGTAATAATCATACTGATTTTAGTAATGTTGCAATGCCTTATGCATT 249134 || ||||| || ||| ||||||||| | || ||| |||| ||| ||||||||||| Sbjct 11647 TGAATGTAAAAATTGTTCTAATCATACAAACATTTCTAAGGTTGAAATTCCTTATGCATT 11706 Query 249135 TAAACTAATGGTTCAAGAATTAACAGCAGTTAATATTCTTCCAAGAATTAGAGCAGAAAA 249194 |||| | | |||||||||||| ||| | || ||| ||| | |||| | | ||| | Sbjct 11707 TAAAATTCTCATTCAAGAATTAATGGCAATGAACATTGCTCCTCGTATTAAAACTGAAGA 11766 Query 249195 A 249195 | Sbjct 11767 A 11767 >seq87 Length=528 Score = 123 bits (136), Expect = 1e-22 Identities = 133/175 (76%), Gaps = 1/175 (1%) Strand=Plus/Minus Query 501332 GAAATTATGGGA-AGCTATAATGACAGCACAGTTTGAAACTGGTTCACCCtatatgttat 501390 ||||| | ||| ||| ||||| |||||||| | || |||||| | || || ||| | | Sbjct 413 GAAATCTTTGGAGAGCAATAATAACAGCACAAATAGAGACTGGTACTCCTTACATGCTTT 354 Query 501391 ataaagataatattaataaaaaatcaaaccagaaaaatataggaataatTAGAAGTTCAA 501450 ||||||||| | ||||| | ||| || || |||||| | |||| |||| |||||| | Sbjct 353 ATAAAGATACTGCTAATAGATTATCTAATCAAAAAAATCTTGGAACTATTAAAAGTTCTA 294 Query 501451 ATTTATGTGCTGAAATTGTAGAATATTCAGATTCTACTGAAACAGCTGCTTGTAA 501505 |||| |||||||||||| | |||||||||||| |||| | |||| |||||| Sbjct 293 ATTTGTGTGCTGAAATTATTGAATATTCAGATGGTACTAATGTTGCTGTTTGTAA 239 >seq1262 Length=14089 Score = 118 bits (130), Expect = 4e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 391046 TATAATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATC 391105 || |||| | ||||| || || ||||| || || ||||| ||||| | || | || | Sbjct 4291 TAAAATGCAGATTTTTGTAAAGACACTTACAGGAAAAACAATTACATTAGAATTAGATCC 4350 Query 391106 ATCTGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGA 391165 | | |||| ||||| || ||||| ||||||||||| || ||||| |||||||| || Sbjct 4351 AGCAGATACTATTGAGACTGTTAAAGCGAAAATTCAAGACAAAGAAGGTATTCCTCCAGA 4410 Query 391166 TCAACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTA 391225 ||||| | | || || | || |||||||| ||||||||||||||| || ||||| Sbjct 4411 CCAACAGAGACTTATATTTGCGGGAAAACAACTAGAAGATGGAAGAACTCTGAGTGATTA 4470 Query 391226 TAATATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGG 391273 || || | ||||| || | || | || |||||||| ||||| Sbjct 4471 CAACATACAGAAGGAAAGTACTTTGCATCTTGTTTTAAGACTTAGAGG 4518 >seq2 Length=31068 Score = 118 bits (130), Expect = 4e-21 Identities = 265/385 (69%), Gaps = 25/385 (6%) Strand=Plus/Minus Query 363711 AAAACAGATGGAAGAAAAACCACTGTAATTAG-AGGAATTCCTAAACTAGAAGATGCTAA 363769 || |||||||||| ||||| | | ||||| ||| ||||||||| |||| |||||||| Sbjct 30837 AAGACAGATGGAACAAAAAGTAA-GAAATTAACAGGTATTCCTAAATTAGACGATGCTAA 30779 Query 363770 TAAAGCAGGAACAAAAGAT-GCTCATAAATGTGGATTATATTTAGCAGAGGGAGATTCTG 363828 | || || || ||| || | ||| | ||| ||| |||| |||| |||||||||| Sbjct 30778 CCATGCTGGTACTAAAAATAGTTCAGAG-TGTACATTGATTTTAACAGAAGGAGATTCTG 30720 Query 363829 CTCTTTCTATGATTCTGT--CAGGGTTATCAAGTAAAGATAGAAATTTTTATGGTGCCTT 363886 | | || | |||| |||| | || | || || || ||||||| || Sbjct 30719 CAAAAAC-ATTAG-CTGTTGCAGGTCTTTCGGTTGTAGGAAGGGATAAGTATGGTGTTTT 30662 Query 363887 TCCGTTAAAAGGAAAATTATTAAATGTAAGAGAAGCATCAGTTAAACAAATTATGGGAAA 363946 || ||| |||||| | |||||||||||||||||||| ||||||||| | | ||| Sbjct 30661 CCCTTTACGTGGAAAACTTTTAAATGTAAGAGAAGCATCTTATAAACAAATAAGTGAAAA 30602 Query 363947 TGATGAGATATCAAACCTTaaaaaa-aTTTTAGGATT---ACGTAATGAATTTAAATATG 364002 ||| || | | | | |||||||| ||||||||||| || |||| | || |||| Sbjct 30601 TGAAGA-AGTTAACTCATTAAAAAAGATTTTAGGATTGCAACATAATAAGGTT---TATG 30546 Query 364003 AAATGGATGAAGAATTTAATACTTTAAGATATGGAAAAGTAATAATTTTATGTGATTCAG 364062 | | || |||||| | |||||||||||| | || || ||| | ||| || Sbjct 30545 ATACGG--------TTTAAT-CATTAAGATATGGACATGTTATGATTATGACAGATCAAG 30495 Query 364063 ATGTAGATGGAAGTCATATTAAGGG 364087 || | |||||| |||||| ||||| Sbjct 30494 ATTTTGATGGATCTCATATAAAGGG 30470 >seq469 Length=503 Score = 114 bits (126), Expect = 5e-20 Identities = 121/159 (76%), Gaps = 3/159 (2%) Strand=Plus/Minus Query 501347 TATAATGACAGCACAGTTTGAAACTGGTTCACCCtatatgttatataaagataatattaa 501406 ||||||| ||||| | || |||||| | || |||||| | ||||| |||| | || Sbjct 343 TATAATG---GCACAAATAGAGACTGGTACTCCTTATATGCTTTATAAGGATACTGCCAA 287 Query 501407 taaaaaatcaaaccagaaaaatataggaataatTAGAAGTTCAAATTTATGTGCTGAAAT 501466 || | |||||| || || ||| | |||| |||| |||||| ||||||||||||||||| Sbjct 286 TAGATTATCAAATCAAAAGAATCTTGGAACTATTAAAAGTTCTAATTTATGTGCTGAAAT 227 Query 501467 TGTAGAATATTCAGATTCTACTGAAACAGCTGCTTGTAA 501505 | || ||||||||| || |||||| |||| |||||| Sbjct 226 AATTGAGTATTCAGATAATAATGAAACGGCTGTTTGTAA 188 >seq519 Length=16818 Score = 95.1 bits (104), Expect = 5e-14 Identities = 132/183 (72%), Gaps = 3/183 (2%) Strand=Plus/Minus Query 96115 TACTTTACTAATGTTTAATGCTGGGCTCCAGTTATTTTTTAAAATATCTAAACAAATTGC 96174 |||||| ||| | ||||| || ||||| ||||| || | || |||||||||| | | Sbjct 1527 TACTTTTTCAATAGTCAATGCAGGACTCCAATTATTCTTAAGTATGTCTAAACAAA-TAC 1469 Query 96175 ACCTGTAGTACTAATATTTGGATGATAAATAGGAGTTTTAAATATAATTTTAGGAGGCTT 96234 | || || |||||||| |||||||| ||||||||| | | ||| || || || Sbjct 1468 TACAGTTGT--GAATATTTGAGTGATAAATTCTAGTTTTAAAGGTTACTTTTGGTGGTTT 1411 Query 96235 ATATGGATAGTCTTCAGGAAAAGTAATTTCTAATTGGAATACTCCACCCTCATAGGGTGT 96294 | | ||||||||| ||||| |||| ||| || ||||| |||| | |||| ||||| Sbjct 1410 AAAGGGATAGTCTGGTGGAAACTTAATAGCTAGTTTGAATATTCCATCGGCATATGGTGT 1351 Query 96295 TCC 96297 ||| Sbjct 1350 TCC 1348 >seq47 Length=784 Score = 93.3 bits (102), Expect = 2e-13 Identities = 141/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 502332 TGGGATTCCTTAATAAATGAAATGAAAAAATATGGAACTAGAAACAGTTTGCTTACAGCA 502391 ||||| || ||| || ||| ||| | |||||| || || |||||| ||| ||| Sbjct 242 TGGGAATCATTACGTAAAGAAGTGATGACGTATGGAGTAAGGAATAGTTTGTTTATTGCA 301 Query 502392 CTAATGCCAACAGCATCTACATCTCAACTATTAGGCAATTATGAATCATTTGAACCATTT 502451 || |||||||||||| ||| || || ||| || || ||||| ||||||||| || Sbjct 302 CTTATGCCAACAGCAAGTACCTCACAGATATGCGGGAACAGTGAATGTTTTGAACCAATT 361 Query 502452 ACTTCTAATATATATACTAGAAGAACTTTAGCAGGTGAATTTATAGT-TGTTAATAAACA 502510 ||| |||| | | ||| || ||||| |||||||| || ||| ||| ||| ||||| Sbjct 362 ACTAGTAATTTGTTTACAAGGAGAACATTAGCAGGAGAGTTT-CAGTGTGTAAATAAGTT 420 Query 502511 TTTAATAAATGATTTGAA 502528 ||| || | ||||| || Sbjct 421 TTTGATGGAAGATTTAAA 438 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975685491940400