Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hepatospora_20eriocheir_20[genbank_20GCA_5F002087885.1_202017-04-12] 1,300 sequences; 4,570,278 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq291 176 3e-38 seq2 154 1e-31 seq630 118 8e-21 seq675 116 3e-20 seq1 107 1e-17 >seq291 Length=15756 Score = 176 bits (194), Expect = 3e-38 Identities = 221/302 (73%), Gaps = 6/302 (2%) Strand=Plus/Minus Query 518025 TATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTC 518084 ||||||||||||| ||||| || ||| ||||| || | | ||||||| || | || Sbjct 8538 TATCAAAATCTTCTCCTCCTAAAAAAGTGTTTCCATTTGTTGATTTTACTTGAAAGATTC 8479 Query 518085 CATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTA 518144 |||||| | ||||| || | |||| ||||| || || | |||| ||| || Sbjct 8478 CATCTTTTATTTCCAAAATAGAAATATCAAATGTTCCTCCTCCTAAATCATAAACTGCTA 8419 Query 518145 CATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTT 518204 || |||| ||| || |||||||| ||||| || ||||| || || ||||||| Sbjct 8418 TATAACCTTCT----CTT--TTCTTATCAAGTCCATAAGCTAAAGCGGCTGCCGTTGGTT 8365 Query 518205 CATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTC 518264 |||||||||||||||||||||| ||| || | | || |||||||| || ||||||| Sbjct 8364 CATTAATAATTCTCAAAACATTCCAACCTGCTAATTGACCAGCATCTTTTGTTGCTTGTC 8305 Query 518265 TTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAA 518324 | || | ||| ||||||||||| |||||||||||||| ||| ||| || ||||||| Sbjct 8304 TCTGAGTATCATTAAAATATGCTGGAACAGTAATAACAGCAGATCCTACATCCTTACCAA 8245 Query 518325 TA 518326 || Sbjct 8244 TA 8243 Score = 107 bits (118), Expect = 1e-17 Identities = 194/287 (68%), Gaps = 15/287 (5%) Strand=Plus/Minus Query 322085 TCAAAATCTTCTCCTCCCAAATGTGTATTACCACCTACTGCTAATGTTCTAAATACTCCA 322144 ||||||||||||||||| ||| || || ||| | || | | | ||| | |||| Sbjct 8536 TCAAAATCTTCTCCTCCTAAAAAAGTGTTTCCATTTGTTGATTTTACTTGAAAGATTCCA 8477 Query 322145 TTTGAGATATTCATTAACGAAACATCTAAAGTCCCAGCTCCTAAGTCATAAACAATTACG 322204 | | || | || | |||| ||| || || || ||||||| |||||||| || Sbjct 8476 TCTTTTATTTCCAAAATAGAAATATCAAATGTTCCTCCTCCTAAATCATAAACTGCTATA 8417 Query 322205 TTACCACCAGtttttttATTCCATTTTTCACTTCCTAAACCGTATGCAAGAGCTGCTGCA 322264 | ||| | |||| |||| | | || || || | ||| ||||| Sbjct 8416 TAACCTTCTCTTTTCTTAT---------------CAAGTCCATAAGCTAAAGCGGCTGCC 8372 Query 322265 GTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGCAATTTTAGCAGAATCAAGAGTT 322324 |||||||||||||| ||| | | ||||| |||| || | || | ||| ||| ||| Sbjct 8371 GTTGGTTCATTAATAATTCTCAAAACATTCCAACCTGCTAATTGACCAGCATCTTTTGTT 8312 Query 322325 GCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGTAATAACTGC 322371 ||||||||||| | ||||||||||||||||| ||||||||||| || Sbjct 8311 GCTTGTCTCTGAGTATCATTAAAATATGCTGGAACAGTAATAACAGC 8265 >seq2 Length=31068 Score = 154 bits (170), Expect = 1e-31 Identities = 252/363 (69%), Gaps = 0/363 (0%) Strand=Plus/Minus Query 635396 AAATTATATAATGCTCACAAGGCAGGAACCAAAGAAGGATATAAATGTACCCTAATTTTG 635455 |||||| | ||||| || | || || || ||| | | | | ||||| | ||||| Sbjct 30795 AAATTAGACGATGCTAACCATGCTGGTACTAAAAATAGTTCAGAGTGTACATTGATTTTA 30736 Query 635456 ACAGAGGGAGATTCAGCTAAAACATTCGCTATGTCTGGTCTTAATGTTATTGGAAGAGAT 635515 ||||| |||||||| || |||||||| ||| | | |||||| ||| | ||||| ||| Sbjct 30735 ACAGAAGGAGATTCTGCAAAAACATTAGCTGTTGCAGGTCTTTCGGTTGTAGGAAGGGAT 30676 Query 635516 TATTATGGAGTTTTCCCACTTAGAGGAAAACTTTTGAATGTTAGGGATGCTAGTCCTaaa 635575 | ||||| |||||||| | | ||||||||||| ||||| || || || | |||| Sbjct 30675 AAGTATGGTGTTTTCCCTTTACGTGGAAAACTTTTAAATGTAAGAGAAGCATCTTATAAA 30616 Query 635576 aaaaTTGCTGATAATGAGGAAATTACAGCAATCaaaaaaaTTGTTGGACTTGAACAAGGA 635635 |||| ||| ||||| ||| ||| || | ||||| ||| | ||| | |||| Sbjct 30615 CAAATAAGTGAAAATGAAGAAGTTAACTCATTAAAAAAGATTTTAGGATTGCAACATAAT 30556 Query 635636 AAAGTTTATGATGATCTCAAAGGTTTACGATATGGTAGTATTATGATTCTTGCTGATCAA 635695 || ||||||||| | || ||| ||||||| | |||||||| | | |||||| Sbjct 30555 AAGGTTTATGATACGGTTTAATCATTAAGATATGGACATGTTATGATTATGACAGATCAA 30496 Query 635696 GATGTTGATGGGTACCATATCAAAGGATTAATCATGAATTTTATCCATTGTTTTTGGCCA 635755 ||| ||||||| | ||||| || || || || || || ||| | || ||||| ||| Sbjct 30495 GATTTTGATGGATCTCATATAAAGGGGTTGATTATTAACTTTTTTGATCATTTTTATCCA 30436 Query 635756 TCT 635758 ||| Sbjct 30435 TCT 30433 >seq630 Length=18121 Score = 118 bits (130), Expect = 8e-21 Identities = 113/145 (78%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 366966 TAATTTTATCAATAATAAAATAAAAATTGTAGTAGCCACAATAGCATTTGGTATGGGTAT 367025 |||||||| |||||| |||| | |||||||||| |||||||||||||| ||||| || Sbjct 7460 TAATTTTAATAATAATGTAATACAGGTTGTAGTAGCAACAATAGCATTTGGAATGGGAAT 7401 Query 367026 TAATAAACCGGATGTTAGAGTTGTTATTCATTATGGAGCTCCCAAGAATATTGAAGGTTA 367085 ||||||| ||||| ||| |||| ||||||||| | || ||| ||||||| || Sbjct 7400 AGATAAACCAGATGTGAGATTTGTAATTCATTATTCAATACCAAAGTCACTTGAAGGATA 7341 Query 367086 TTATCAAGAAATTGGTAGAGCAGGT 367110 ||||||||||| || || || ||| Sbjct 7340 TTATCAAGAAACAGGAAGGGCTGGT 7316 >seq675 Length=13674 Score = 116 bits (128), Expect = 3e-20 Identities = 249/366 (68%), Gaps = 6/366 (2%) Strand=Plus/Minus Query 303738 TCCACCATCTCTTGATCTACCTTCTGGCGCTTGTCTTGTAAGTAACTGTGTTGGTCCACG 303797 ||| ||||||||||| || ||||| | ||||||||| |||| ||| |||||| | Sbjct 11497 TCCTCCATCTCTTGACCTTCCTTCAACAGGTTGTCTTGTTAGTACTTGTAATGGTCCTCT 11438 Query 303798 AGCGCGTGAGTGGGCCTTGTCGCCTACCATTTGTTTCAATCTCTGATAATATGTCGGACC 303857 || | || || || ||||||| ||||| ||||| |||||||| || || || Sbjct 11437 TGCTCTACCATGCATTTTATCATCTACCATATGTTTTAATCTTTGATAATAAGTAGGTCC 11378 Query 303858 AATAAAAATTTTAACTGGTAATTTTTTACCATTCATTCCATTATACATAGTTTCATTACC 303917 |||||| || || || || ||| | |||| |||| ||||| | ||| ||||| || Sbjct 11377 AATAAAGATACTAGCTTTTAGTTTATAACCAGTCATACCATTGTGCATTACTTCATATCC 11318 Query 303918 CCATTCTTCATAACCAGCAGCAACTAA-TTCATCGTTAATGGCATTA-AGATCAACACTT 303975 || |||| |||| | ||| || | | || | || ||| || | Sbjct 11317 ACAGTCTTGATAATTGAATTCTCTTAACTTACTTGATATTTCTTCTACCGAT--ACTTTA 11260 Query 303976 GTAAATGGTGTTGCATCGCCATACACTCCTTTAACTGCACATAGTTTTCCTAATAAACAT 304035 ||||| ||||| ||||| || | | ||| | |||| | ||||||||| || ||| Sbjct 11259 GTAAAAGGTGTAGCATCTCCCTCTTCACCTGATAAAGCACTAACTTTTCCTAACAAGCAT 11200 Query 304036 TC-AATAAGTTGCCCAATAGTCATACGTTTGGGCATACAATTAGGATTGATAATAATATC 304094 || |||||| || |||||||||||||| || ||| || |||||| ||||| || || Sbjct 11199 TCTAATAAG-TGACCAATAGTCATACGAGATGGGATAGCATGAGGATTAATAATTATGTC 11141 Query 304095 GGGAAT 304100 ||||| Sbjct 11140 AGGAAT 11135 >seq1 Length=15122 Score = 107 bits (118), Expect = 1e-17 Identities = 170/241 (71%), Gaps = 2/241 (1%) Strand=Plus/Minus Query 668848 ATTAAGAGGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAACGTGTCGATATGTC 668907 ||||| ||||||||| || | |||||||| ||||||||| ||| | || ||| | || Sbjct 11839 ATTAA-AGGTAAAGAGGGAAGAATTAGAGGTTGTTTGATGGGTAAAAGAGTTGATTTTTC 11781 Query 668908 TGCACGTACAGTTATTACTTCTGATCCCAATATTGCTCTCAATGAAGTTGGTGTTCCTCT 668967 ||||||||| || |||||| ||||| || |||| || || || |||| ||||| | Sbjct 11780 TGCACGTACTGTAATTACTCCTGATAGTAACATTGAACTTGATCAAATTGGATTTCCTAT 11721 Query 668968 TATTATTGCTAAAAATCTTACTTTTGACGAAATTGTAACAGAACATAATATTGAGTATTT 669027 || | ||||||| | | || ||| |||| |||||| | ||||| | | | || Sbjct 11720 TAAGTTAGCTAAAATTTTAACATTTCCTGAAAAAGTAACACCATTTAATAATCAAAAGTT 11661 Query 669028 GACTCAATTAGTGAAAAATGGTAAAAGAGTATATCCGGGTGCCAATTTTGTAATCA-AAC 669086 ||| | || |||||| || | |||||| ||||| |||| |||||||| ||| Sbjct 11660 ACAAAAATGTATTAATAATGGTCCAACTGAATATCCAGGTGCTAATTATGTAATCAGAAC 11601 Query 669087 A 669087 | Sbjct 11600 A 11600 Score = 105 bits (116), Expect = 5e-17 Identities = 79/93 (85%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 671653 ACCTTTTGAATTTTTCTTCCAAGTAATGGCAGGTCGTGAAGGTATTATTAATACGGCTAT 671712 ||||| |||||||||||| || | |||| ||||||||||||||||||| |||| ||||| Sbjct 10445 ACCTTATGAATTTTTCTTTCACGCTATGGGAGGTCGTGAAGGTATTATTGATACAGCTAT 10386 Query 671713 TAAAACTGCTGATACTGGTTATATTCAAAGAAA 671745 ||||||| | || | ||| || ||||||||||| Sbjct 10385 TAAAACTTCAGAGATTGGGTACATTCAAAGAAA 10353 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780757889717800