Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hepatospora_20eriocheir_20[genbank_20GCA_5F002087885.1_202017-04-12] 1,300 sequences; 4,570,278 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq1262 152 4e-31 seq675 113 4e-19 seq1 104 2e-16 seq68 98.7 8e-15 seq291 91.5 1e-12 seq22 87.8 1e-11 >seq1262 Length=14089 Score = 152 bits (168), Expect = 4e-31 Identities = 159/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 563266 ACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCA 563325 |||||||| | |||||||| || || ||||||||| ||||||||| |||||| Sbjct 4503 ACAAGATGCAAAGTACTTTCCTTCTGTATGTTGTAATCACTCAGAGTTCTTCCATCTTCT 4444 Query 563326 AGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGA 563385 ||||||||||| ||||| |||||||| || || || |||||||| |||||||| |||||| Sbjct 4443 AGTTGTTTTCCCGCAAATATAAGTCTCTGTTGGTCTGGAGGAATACCTTCTTTGTCTTGA 4384 Query 563386 ATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTAACAGTTTTA 563445 ||||| ||| || | |||||| ||||| | || |||| | |||| ||||| Sbjct 4383 ATTTTCGCTTTAACAGTCTCAATAGTATCTGCTGGATCTAATTCTAATGTAATTGTTTTT 4324 Query 563446 CCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 || ||||| || || || ||||| ||||| Sbjct 4323 CCTGTAAGTGTCTTTACAAAAATCTGCAT 4295 >seq675 Length=13674 Score = 113 bits (124), Expect = 4e-19 Identities = 271/405 (67%), Gaps = 4/405 (1%) Strand=Plus/Minus Query 344247 ACAATGGGTTTTATCTCCCACCATTTGTTTGAGACGTTGATAATATGTTGGACCAATGAA 344306 || ||| ||||||| | ||||| ||||| | | ||||||||| || || ||||| || Sbjct 11431 ACCATGCATTTTATCATCTACCATATGTTTTAATCTTTGATAATAAGTAGGTCCAATAAA 11372 Query 344307 TATTTTAACTTCCATTCTTTGTCCCGTCATTCCATTATACATTGTTTCATTTCCCCATGC 344366 || || ||| | | | | || ||||| ||||| | |||| ||||| ||| || | Sbjct 11371 GATACTAGCTTTTAGTTTATAACCAGTCATACCATTGTGCATTACTTCATATCCACAGTC 11312 Query 344367 TTCATGTCCTAAAGCTACTAAATCATCATTAATTTTATTAATATTA-ACTCCTGTAAATG 344425 || || || || ||| | | | | | ||| || | ||| ||||| | Sbjct 11311 TTGATAATTGAATTCTCTTAACTTA-CTTGATATTTCTTCTACCGATACTTTAGTAAAAG 11253 Query 344426 GAGTTGCATCTCCATATACCCCTTTAATTGCACAAACTTTACCTAGTAAACATTCAATTA 344485 | || |||||||| | | | ||| | |||| |||||| |||| || ||||| | || Sbjct 11252 GTGTAGCATCTCCCTCTTCACCTGATAAAGCACTAACTTTTCCTAACAAGCATTCTAATA 11193 Query 344486 ATTGACCTATCGTCATACGTTTGGGCATACAATTAGGATTAATAATAATATCAGGAATTA 344545 | ||||| || |||||||| || ||| || |||||||||||| || |||||||| | Sbjct 11192 AGTGACCAATAGTCATACGAGATGGGATAGCATGAGGATTAATAATTATGTCAGGAATGA 11133 Query 344546 -ATCCTGATTTTGTGAATGGAAGATCTGCACGATGAATTTTAAATCCAACTGTTCCTTTT 344604 | ||| | || ||||| | ||| | ||| | ||| ||| | ||||||||| Sbjct 11132 TACCCTCA-CCAGTAAATGGCATATCCTCTTGATCTAAAATAATTCCTATTGTTCCTTTC 11074 Query 344605 TGTCCAGCTCTTGATGAGAATTTATCACCTACTGCTGGAATTCTT 344649 || || ||| || | ||||||||||| | | || |||||| Sbjct 11073 TGAGCATGTCTAGAAGCAAATTTATCACCCCTTTCAGGTATTCTT 11029 >seq1 Length=15122 Score = 104 bits (114), Expect = 2e-16 Identities = 148/207 (71%), Gaps = 1/207 (0%) Strand=Plus/Plus Query 390799 TTTTCAGTATTAATACCATTATCACCATATACACATTGAATTAATTTGTCATTGGCATTT 390858 |||| || || || |||| ||||||||| | | |||| | | |||| |||||| Sbjct 10242 TTTTTAGAATCAAATCCATCATCACCATACTTAAACTGAAAAATGCTATCATAAGCATTT 10301 Query 390859 CTTACGGTACCATCATACTCTACTTTAATGTCTTCTAACATTTTAACTAATTTTCTTTGG 390918 || || | | ||| | |||||| ||||| | | |||| ||| |||||||| Sbjct 10302 CTAACAGAATAGTCAAATAAAACTTTAGCATCTTCCATAGTCTTAATTAACTTTCTTTGA 10361 Query 390919 ATATAACCAGTGTCTGCAGTTTTAATTGCAGTATTAATAATACCTTCTCTTCCTGCCATA 390978 || || ||| | |||| ||||||||| || |||| |||||||||||| | ||| ||||| Sbjct 10362 ATGTACCCAATCTCTGAAGTTTTAATAGCTGTATCAATAATACCTTCACGACCTCCCATA 10421 Query 390979 ACTTGGAAGAAAAATTCCATAGGATTG 391005 | || |||||||||| |||| | ||| Sbjct 10422 GCGTGAAAGAAAAATT-CATAAGGTTG 10447 >seq68 Length=32742 Score = 98.7 bits (108), Expect = 8e-15 Identities = 185/270 (69%), Gaps = 4/270 (1%) Strand=Plus/Plus Query 368893 GCTGATTTTGTAACAGAATCAATTGATCAAACACGTGGTTGGTTTTATACCCTATTAGTA 368952 ||||||||| || ||| || ||||||||| | || ||||||||||| || || Sbjct 19072 GCTGATTTTATAGGTGAAGGTATCGATCAAACAAGGGGATGGTTTTATACTCTTCATGTT 19131 Query 368953 TTATCCACAGCTATTTTCGATAAACCGGCTTTTAAAAATGTAATAGTAACTGGTATTGTT 369012 |||| ||| | | || | ||||| || ||||||||||| || || | ||| ||||| Sbjct 19132 CTATCAACACTTTTATTTAACAAACCAGCATTTAAAAATGTGATTGTTAATGGAATTGTG 19191 Query 369013 AATGCATCTGATGGTCAAAAGATGTCAAAAAG--TAAGGGTAATTATTCCGATCCTAATA 369070 || | |||||| | || |||||||| || ||| |||||| | || | | Sbjct 19192 TTAGCTGCAGATGGTAAGAAAATGTCAAAGAGATTAA--AAAATTATCCATCACCAACAA 19249 Query 369071 TTTTAATTGATAAATTTGGTGCTGATACTTTGAGATTATACCTATTGTCATCACCTGTAG 369130 | || ||||| || ||||||||| | || || || || || | ||||||||||||| Sbjct 19250 CTATATTTGATTCATACGGTGCTGATTCATTAAGGTTTTATTTACTCTCATCACCTGTAG 19309 Query 369131 TAAAAGCAGAATCTATTAAATTTGATGAAA 369160 | | | ||| | | || ||| |||||| Sbjct 19310 TTGAGGGTGAAAATTTAAAGTTTAATGAAA 19339 >seq291 Length=15756 Score = 91.5 bits (100), Expect = 1e-12 Identities = 103/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 550399 TGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGC 550458 ||| || || ||||| ||||||||||||||||| | || | ||||| || |||||||| Sbjct 8264 TGCTGTTATTACTGTTCCAGCATATTTTAATGATACTCAGAGACAAGCAACAAAAGATGC 8323 Query 550459 TGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACT 550518 ||| | | || || |||||| | | ||||| |||||||| || || || || | Sbjct 8324 TGGTCAATTAGCAGGTTGGAATGTTTTGAGAATTATTAATGAACCAACGGCAGCCGCTTT 8383 Query 550519 TGCATATGGACTTGATAA 550536 || |||||||||||||| Sbjct 8384 AGCTTATGGACTTGATAA 8401 Score = 87.8 bits (96), Expect = 1e-11 Identities = 99/133 (74%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 361701 CAAGACCATAAGCTAATGAAGCAGCTGTTGGTTCGTTAATTATTTTAATAACATTGAGTC 361760 |||| ||||||||||| | || || |||||||| ||||| ||| | | |||||| | Sbjct 8397 CAAGTCCATAAGCTAAAGCGGCTGCCGTTGGTTCATTAATAATTCTCAAAACATTCCAAC 8338 Query 361761 CCGCTATTTTTGATGCATCTAAAGTGGCTTGACGTTGTGCATCATTAAAATATGCAGGAA 361820 | |||| || |||||| || ||||| | || | ||||||||||||||| |||| Sbjct 8337 CTGCTAATTGACCAGCATCTTTTGTTGCTTGTCTCTGAGTATCATTAAAATATGCTGGAA 8278 Query 361821 CAGTAATCACTGC 361833 ||||||| || || Sbjct 8277 CAGTAATAACAGC 8265 >seq22 Length=80051 Score = 87.8 bits (96), Expect = 1e-11 Identities = 197/287 (69%), Gaps = 12/287 (4%) Strand=Plus/Minus Query 390807 ATTAATACCATTATCACCATATACACATTGAATTAATTTGTCATTGGCATTTCTTACGGT 390866 ||||| ||||| |||||||| ||| | || || | || | || |||||||| || Sbjct 27858 ATTAAGACCATCCTCACCATACACAAACTGGATAATATTTTTATGACTGTTTCTTACAGT 27799 Query 390867 ACCATCATACTCTACTTTAATGTCTTCTAACATTTTAACTAATTTTCTTTGGATATAACC 390926 |||||| | ||| || ||||| | || | ||| | | ||| ||||| || Sbjct 27798 TGAATCATAATATACAGAAAGATCTTCAAGTGCCTTCATTAACCTACGTTGCATATATCC 27739 Query 390927 AGTGTCTGCAGTTTTAATTGCAGTAT-TAATAATACCTTCTCTTCCTGCCATAACT---T 390982 ||| ||||| ||||||| ||| |||| || ||| ||||||||| || | |||| | Sbjct 27738 AGTCTCTGCTGTTTTAACTGCTGTATCTACTAA-ACCTTCTCTACCAGA---AACTGTAT 27683 Query 390983 GGAAGAAAAATTCCATAGGAT-TGAGTCCAGAAATAAATGATCCAAA-ACAAAATCCTCT 391040 |||| ||| |||| ||| || ||||||| | || ||||| ||| |||||| ||||| Sbjct 27682 GGAAAAAATATTC-ATATGAAGTGAGTCCGGTAAAGAATGAATTAAATACAAAA-CCTCT 27625 Query 391041 TGCAGAAGGACTATCATCATGTTGTGCAAACATAGGTAATGTTCTAT 391087 || || || || ||||| | ||| ||||||||||||| Sbjct 27624 AGCTGATGGTGAATTATCATACTTATTAAAATGGGGTAATGTTCTAT 27578 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029227250137000