Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hepatospora_20eriocheir_20[genbank_20GCA_5F002087885.1_202017-04-12] 1,300 sequences; 4,570,278 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq68 159 2e-33 seq291 147 1e-29 seq1262 123 2e-22 seq1 113 3e-19 seq47 111 1e-18 seq580 93.3 3e-13 seq1043 89.7 3e-12 >seq68 Length=32742 Score = 159 bits (176), Expect = 2e-33 Identities = 200/270 (74%), Gaps = 6/270 (2%) Strand=Plus/Plus Query 297421 GCAGATTTTATAACAGAATCAATTGATCAAACAAGAGGTTGGTTTTATACTTTATTAGTT 297480 || ||||||||| ||| || ||||||||||| || |||||||||||| | ||| Sbjct 19072 GCTGATTTTATAGGTGAAGGTATCGATCAAACAAGGGGATGGTTTTATACTCTTCATGTT 19131 Query 297481 CTTTCTACAGCTATATTTAACAAACCAGCATTTAAAAATGTAATTGTTACAGGAATTGTT 297540 || || ||| | |||||||||||||||||||||||||||| ||||||| |||||||| Sbjct 19132 CTATCAACACTTTTATTTAACAAACCAGCATTTAAAAATGTGATTGTTAATGGAATTGTG 19191 Query 297541 AACGCAGCTGATGGACAAAAAATGTCAAAAAG--TAAAGGTAATTATCCTGATCCAAATA 297598 || || ||||| | ||||||||||| || |||| |||||||| |||| | Sbjct 19192 TTAGCTGCAGATGGTAAGAAAATGTCAAAGAGATTAAA--AAATTATCCATCACCAACAA 19249 Query 297599 TTTTGATGGATAAATATGGTGCAGATACTTTACGTCTTTATTTATTATCAACACCTGTAG 297658 | | | ||| ||| ||||| ||| | ||| | |||||||| | ||| ||||||||| Sbjct 19250 CTATATTTGATTCATACGGTGCTGATTCATTAAGGTTTTATTTACTCTCATCACCTGTAG 19309 Query 297659 TTAAAGCCGAATCAATTAAA-TTTGATGAA 297687 || | | ||| | ||||| ||| ||||| Sbjct 19310 TTGAGGGTGAA-AATTTAAAGTTTAATGAA 19338 Score = 116 bits (128), Expect = 2e-20 Identities = 162/224 (72%), Gaps = 5/224 (2%) Strand=Plus/Plus Query 296066 TTGAGAGAATTGGAAGATGGATTGATATTAATAATGAATATAAAACAATGGATAAAAATT 296125 |||| ||| | || |||||||| || || | |||||| ||||||||| || || Sbjct 17642 TTGAAAGATTAGGTAGATGGATAGAATTTGAAGGGTCATATAAGACAATGGATTTAAGTT 17701 Query 296126 TTATGGAATCTGTTATTTGGTCATTTAAACAACTTTATGAAAAGGAAATG--ATTTTTGA 296183 ||||||||||||| | | |||| || ||||| | ||||| |||| | Sbjct 17702 TTATGGAATCTGTA--TGGAATATTTTTTCACATTTATTTCATAGAAATTTAATTTATAG 17759 Query 296184 AGGTTATAAAGTTATGCCTTATTCTACTGGTTGCAATACACCATTATCTCATTTTGAGGC 296243 ||| | ||| ||||||||| |||||||| || || ||||| |||||| ||||||| || Sbjct 17760 AGGATTTAAGATTATGCCTTGTTCTACTGCATGTAAGACACCTTTATCTAATTTTGAAGC 17819 Query 296244 AAAACAAAATTATAAAGAGATTATTGATCCATCTGTTACTTGTT 296287 | |||||||||||| || || ||||||||| | |||||||| Sbjct 17820 ATCACAAAATTATAAGGATGTTTCTGATCCATCAG-TACTTGTT 17862 >seq291 Length=15756 Score = 147 bits (162), Expect = 1e-29 Identities = 117/141 (83%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 474736 TGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGC 474795 ||| || ||||||||||||||||||||||||||| |||| | |||||||| |||||||| Sbjct 8264 TGCTGTTATTACTGTTCCAGCATATTTTAATGATACTCAGAGACAAGCAACAAAAGATGC 8323 Query 474796 GGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACT 474855 || | | |||||| |||||||| | ||||||||||||||||| |||||||| | Sbjct 8324 TGGTCAATTAGCAGGTTGGAATGTTTTGAGAATTATTAATGAACCAACGGCAGCCGCTTT 8383 Query 474856 TGCTTATGGTCTTGATAAGAA 474876 |||||||| ||||||||||| Sbjct 8384 AGCTTATGGACTTGATAAGAA 8404 Score = 87.8 bits (96), Expect = 1e-11 Identities = 99/133 (74%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 290823 CAAGACCATATGTTAATGAAGCTGCTGTTGGTTCATTTATAATTCTTAATACATCAAGAC 290882 |||| ||||| | ||| | ||||| ||||||||||| |||||||| || |||| || Sbjct 8397 CAAGTCCATAAGCTAAAGCGGCTGCCGTTGGTTCATTAATAATTCTCAAAACATTCCAAC 8338 Query 290883 CTGCAATTTTTGCCGAATCTAAAGTTGCCTGGCGTTGCGCATCATTAAAATAAGCAGGGA 290942 |||| | || | | |||| ||||| || | || | |||||||||||| || || | Sbjct 8337 CTGCTAATTGACCAGCATCTTTTGTTGCTTGTCTCTGAGTATCATTAAAATATGCTGGAA 8278 Query 290943 CTGTAATAACAGC 290955 | ||||||||||| Sbjct 8277 CAGTAATAACAGC 8265 >seq1262 Length=14089 Score = 123 bits (136), Expect = 2e-22 Identities = 153/207 (74%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 480564 ACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTTATCTTCA 480623 |||||||| | |||||||| || | || |||||| |||||||| |||||| Sbjct 4503 ACAAGATGCAAAGTACTTTCCTTCTGTATGTTGTAATCACTCAGAGTTCTTCCATCTTCT 4444 Query 480624 AGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGA 480683 ||||| ||||| ||||| ||||| | ||||| || |||||||| ||||| ||||||||| Sbjct 4443 AGTTGTTTTCCCGCAAATATAAGTCTCTGTTGGTCTGGAGGAATACCTTCTTTGTCTTGA 4384 Query 480684 ATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAATAGTTTT 480742 || || ||| |||| ||||||||||| | || | | ||| | ||||| ||||| Sbjct 4383 ATTTTCGCTTTAACAGTCTCAATAGTATCTGCTGGATCTA-ATTCTAATGTAATTGTTTT 4325 Query 480743 ACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || ||||| || ||||| || Sbjct 4324 TCCTGTAAGTGTCTTTACAAAAATCTG 4298 >seq1 Length=15122 Score = 113 bits (124), Expect = 3e-19 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 318646 CCATTATCACCATAAACACATTGAATCAATTTATCATTAGCATTTCTTACAGTACCATCA 318705 |||| ||||||||| | | |||| | |||||| ||||||||| |||| | ||| Sbjct 10257 CCATCATCACCATACTTAAACTGAAAAATGCTATCATAAGCATTTCTAACAGAATAGTCA 10316 Query 318706 TATTCCACTTTAATATCTTCTAGTATTTTAACTAATTTTCTTTGTACATAACCTGTGTCT 318765 || |||||| |||||| | | |||| ||| |||||||| | || || | ||| Sbjct 10317 AATAAAACTTTAGCATCTTCCATAGTCTTAATTAACTTTCTTTGAATGTACCCAATCTCT 10376 Query 318766 GCAGTTTTAATAGCAGTATTAATAATACCTTCTCTTCCTGCCATAACTTGGAAAAAGAAT 318825 | |||||||||||| |||| |||||||||||| | ||| ||||| | || || || ||| Sbjct 10377 GAAGTTTTAATAGCTGTATCAATAATACCTTCACGACCTCCCATAGCGTGAAAGAAAAAT 10436 Query 318826 TCAGCAGGTCCTAAACC 318842 ||| |||| ||||| Sbjct 10437 TCATAAGGTTGCAAACC 10453 >seq47 Length=784 Score = 111 bits (122), Expect = 1e-18 Identities = 266/398 (67%), Gaps = 11/398 (3%) Strand=Plus/Minus Query 591836 TCTCCTGCTAAAGTACTTCTTGAATAAATATTTTCGGTAAATGGTTCAATACATTCATTA 591895 ||||||||||| || || |||| | | | ||| |||| |||||||| ||||||| | Sbjct 399 TCTCCTGCTAATGTTCTCCTTGTAAACAAATTACTAGTAATTGGTTCAAAACATTCACTG 340 Query 591896 TATCCTTTAATTTGAGATGTACTTGCTGTTGGCATACATGTAGTAGTTAAACTGTTTCTA 591955 | || || || || |||||||||||||||||| || | || ||||| || || Sbjct 339 TTCCCGCATATCTGTGAGGTACTTGCTGTTGGCATAAGTGCAATAAACAAACTATTCCTT 280 Query 591956 ACACCATATATCATTATCTGTTCCCGAAGAGTTTTCCAATCCCACATTCCACTTAATTT- 592014 || ||||| |||| | | || || | | || ||| ||||||||||| | ||| Sbjct 279 ACTCCATACGTCATCACTTCTTTACGTAATGATTCCCAGTCCCACATTCCTGACAGTTTG 220 Query 592015 AT-CTTCACCAAGATTCCATAAATCAAACTGGAATTTACCTTT--TGAAAGTGGACTTCC 592071 || ||| || || | ||||| |||||| | ||||| | ||| || ||| Sbjct 219 ATATTTCTGGAACTTTTC-----TCAAATTGGAATATTCCTTTACTTAAATCAGA--TCC 167 Query 592072 CCAAAAGGTTTCATATGGACCAGATTCTTTGGCCATTTGTAATGATTCTGTCATTGTTCC 592131 | ||| || ||||| |||| | | || || | || || ||| | | | || | | Sbjct 166 CACAAACGTATCATAACAACCACTTACCTTAGCAAGTTCTACTGACTTTTCTACTGCTGC 107 Query 592132 AAAATATATAGTTTCAAATATTTTCCTATTAAGATCTCGAGCAATATCAGAATCAAATGG 592191 | | || |||||||||||||| || ||||| | ||||| || | | |||||||| Sbjct 106 ATAGTACATAGTTTCAAATATCTTACTATTTAAATCTCTTGCCTCTTTACTTTCAAATGG 47 Query 592192 AATTTTAAATATAGCAAACACATCGGCTAATCCTTGTA 592229 | | | || ||| ||||| ||||||||||||| Sbjct 46 GTATCTCATCATCATAAATACATCTGCTAATCCTTGTA 9 >seq580 Length=1103 Score = 93.3 bits (102), Expect = 3e-13 Identities = 294/445 (66%), Gaps = 13/445 (3%) Strand=Plus/Plus Query 594353 TTGGGTTGTTGAGGAAGTTGATCTTTCTAAAGATGTTTCAGATTGGAATAATTTACTGAG 594412 |||| |||||| ||| ||||| || ||||||||| | |||| | | |||| | Sbjct 587 TTGGACTGTTGAAGAAATTGATTTTACTAAAGATGCTAATGATTTTGAAACTTTA---AA 643 Query 594413 TGAAAATGACAGAATATTTATTATGCATGTACTTGCATTTTTTGCATCAGCAGATGGTAT 594472 || |||| | | || |||| ||| || || || |||||| | |||||||||| Sbjct 644 CGAGGATGAGAAGTTTTTCATTAAAACTGTGCTAGCTTTCTTTGCAGCCTCAGATGGTAT 703 Query 594473 TGTAAATGCAAATATAAAAGAAAATTTAATTGATGTTGTTAAAATTAAAGAAGCAGAATG 594532 ||| ||| |||| || |||| ||| | | ||| || | || ||||| ||| | Sbjct 704 TGTTAATCAAAATTTATTAGAACGTTTTACTAATGAAATTCACATGTTAGAAGT-GAA-G 761 Query 594533 TGCAT---ATGGTAAACAATTTGAAATGGAAAATGCACATGGAGAAATGTATTCATTGAT 594589 | ||| || || ||||| | || ||||||| ||| || | || || | | Sbjct 762 T-CATTTTATAGTTTACAATGTTCTATTGAAAATGTTCATAATGAGACATACTCTAAGTT 820 Query 594590 GTTAGATACATTTGTAAAAGATGATATACTTAAGGATAAATTAATTAAAGCCATAAAA-A 594648 | |||| || || | || |||||| | ||||| ||| |||| | || || | Sbjct 821 GATAGAAACTCTTATCAAGGATGATCGTGAGAGGGATATTTTATTTAACGGTATTGAACA 880 Query 594649 CTATGCCAAGTATTaaaaaaaaaGCAGATTGGTGTAAAAAATGGATTAAATCTGATAAAA 594708 ||| || |||||| ||||| || |||||| | ||||||||| | || || | | Sbjct 881 TTAT-CCTTCTATTAAGAAAAAGGCTGATTGGGCTCTTAAATGGATTCATTCAAATGAGA 939 Query 594709 CTTATGCACA-TAAATTAGTTGCATTTGCTATTGTTGAAGGTGTATTTTTTAGTGGATCA 594767 || || ||| || | | ||||||||||| |||||||||| |||| ||| ||||| Sbjct 940 GTTTTG-ACACTAGAATGATTGCATTTGCTTGTGTTGAAGGTATATTCTTTTCAGGATCT 998 Query 594768 TTCGCGTCGATATTCTGGTTAAAAA 594792 || || | ||||| ||| | |||| Sbjct 999 TTTGCTGCAATATTTTGGCTGAAAA 1023 >seq1043 Length=1839 Score = 89.7 bits (98), Expect = 3e-12 Identities = 294/449 (65%), Gaps = 11/449 (2%) Strand=Plus/Plus Query 594353 TTGGGTTGTTGAGGAAGTTGATCTTTCTAAAGATGTTTCAGATTGGAATAATTTACTGAG 594412 |||| |||||| ||| |||| || ||||||||| | |||| | | |||| | Sbjct 1323 TTGGACTGTTGAAGAAATTGACTTTACTAAAGATGCTAATGATTTTGAAACTTTA---AA 1379 Query 594413 TGAAAATGACAGAATATTTATTATGCATGTACTTGCATTTTTTGCATCAGCAGATGGTAT 594472 || |||| | | || |||| ||| | || || |||||| | |||||||||| Sbjct 1380 CGAGGATGAGAAGTTTTTCATTAAAACTGTGTTAGCTTTCTTTGCAGCCTCAGATGGTAT 1439 Query 594473 TGTAAATGCAAATATAAAAGAAAATTTAATTGATGTTGTTAAAATTAAAGAAGCAGAATG 594532 ||| ||| |||| || |||| ||| | | ||| || | || ||||| ||| | Sbjct 1440 TGTTAATCAAAATTTATTAGAACGTTTTACTAATGAAATTCACATGTTAGAAGT-GAA-G 1497 Query 594533 TGCAT---ATGGTAAACAATTTGAAATGGAAAATGCACATGGAGAAATGTATTCATTGAT 594589 | ||| || || ||||| | || ||||||| ||| || | || || | | Sbjct 1498 T-CATTTTATAGTTTACAATGTTCTATTGAAAATGTTCATAATGAGACATACTCTAAGTT 1556 Query 594590 GTTAGATACATTTGTAAAAGATGATATACTTAAGGATAAATTAATTAAAGCCATAAAA-A 594648 | |||| || || | || |||||| | ||||| ||| |||| | || || | Sbjct 1557 GATAGAAACTCTTATCAAGGATGATCGTGAGAGGGATATTTTATTTAACGGTATTGAACA 1616 Query 594649 CTATGCCAAGTATTaaaaaaaaaGCAGATTGGTGTAAAAAATGGATTAAATCTGATAAAA 594708 ||| || |||||| ||||| || |||||| | ||||||||| | || || | | Sbjct 1617 TTAT-CCTTCTATTAAGAAAAAGGCTGATTGGGCTCTTAAATGGATTCATTCAAATGAGA 1675 Query 594709 CTTATGCACATAAATTAGTTGCATTTGCTATTGTTGAAGGTGTATTTTTTAGTGGATCAT 594768 || || || | | ||||||||||| |||||||||| |||| ||| ||||| | Sbjct 1676 GTTTTGATACTAGAATGATTGCATTTGCTTGTGTTGAAGGTATATTCTTTTCAGGATCTT 1735 Query 594769 TCGCGTCGATATTCTGGTTAAAAACAAGA 594797 | || | ||||| ||||| |||| |||| Sbjct 1736 TTGCTGCAATATTTTGGTTGAAAAAAAGA 1764 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268123436692400