Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hepatospora_20eriocheir_20[genbank_20GCA_5F002087885.1_202017-04-12] 1,300 sequences; 4,570,278 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq1262 178 3e-39 >seq1262 Length=14089 Score = 178 bits (196), Expect = 3e-39 Identities = 178/231 (77%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 82581 CTACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCA 82640 ||||| ||||| | | | ||| | |||| |||| ||| |||||||| || |||||| Sbjct 4524 CTACCACCTCTAAGTCTTAAAACAAGATGCAAAGTACTTTCCTTCTGTATGTTGTAATCA 4465 Query 82641 GATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGA 82700 ||| |||| || ||||||||||||||||| ||||| || ||||| ||||| |||||| Sbjct 4464 CTCAGAGTTCTTCCATCTTCTAGTTGTTTTCCCGCAAATATAAGTCTCTGTTGGTCTGGA 4405 Query 82701 GGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCT 82760 || || ||||| || |||||||| || ||||| ||| | ||||| ||||| || ||| Sbjct 4404 GGAATACCTTCTTTGTCTTGAATTTTCGCTTTAACAGTCTCAATAGTATCTGCTGGATCT 4345 Query 82761 ACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 | ||| || || || || || ||||| | ||||||||||| ||||||||| Sbjct 4344 AATTCTAATGTAATTGTTTTTCCTGTAAGTGTCTTTACAAAAATCTGCATT 4294 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981810846440700