Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hepatospora_20eriocheir_20[genbank_20GCA_5F002087885.1_202017-04-12] 1,300 sequences; 4,570,278 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq580 179 9e-40 seq1 168 2e-36 seq1043 167 6e-36 seq746 113 1e-19 seq22 107 5e-18 >seq580 Length=1103 Score = 179 bits (198), Expect = 9e-40 Identities = 372/548 (68%), Gaps = 13/548 (2%) Strand=Plus/Plus Query 131465 ATGTATAAGAAATCTGTTGCGGCCTTCTGGACTGTTGAAGAGATCGATATGACCAAAGAT 131524 |||||||| || | ||| | | | |||||||||||||| || ||| | || |||||| Sbjct 561 ATGTATAAAAAGGCATCTGCTGTCATTTGGACTGTTGAAGAAATTGATTTTACTAAAGAT 620 Query 131525 ATTGATGATTGGGAAAAATTAACCTTGAATGAAAAAGATTTTGTTTCCAAA-GTTCTTGC 131583 | |||||| |||| |||| | | |||| || | |||| || || || || || Sbjct 621 GCTAATGATTTTGAAACTTTAAACGAGGATGAGAA-GTTTTTCATTAAAACTGTGCTAGC 679 Query 131584 ATTCTTCGCCGGAAGTGATGGCATTGTTATTGAAAATCTTGTTATTAA-TTTCATTCAAG 131642 ||||| || | ||||| ||||||| | ||||| || ||| | ||| | | | | Sbjct 680 TTTCTTTGCAGCCTCAGATGGTATTGTTAATCAAAAT-TTATTAGAACGTTTTACTAATG 738 Query 131643 AAATTGATATTCCTGAAGTAACATCGTTCTACACATTTCAAGCCGCTGTTGAATCTATTC 131702 ||||| | || ||||| | || || || | || ||| || ||||| | ||| Sbjct 739 AAATTCACATGTTAGAAGTGAAGTCATTTTATAGTTTACAATGTTCTATTGAAAATGTTC 798 Query 131703 ATAGCGAGATGTATTCATTATTGATTGAGAGTCTTGTTAAAAATGAAGATGATAAAAATA 131762 ||| |||| || || ||||| || | |||| | || |||| ||| | ||| Sbjct 799 ATAATGAGACATACTCTAAGTTGATAGAAACTCTTATCAAGGATGATCGTGAGAGGGATA 858 Query 131763 AATTATTTGATGCTGTAAATAAATTTCCTGCAATTAAAAAGAAAGCAGAATGGGCTATTA 131822 |||||| | | | | | | | |||| | ||||| || || || || |||||| ||| Sbjct 859 TTTTATTTAACGGTATTGAACATTATCCTTCTATTAAGAAAAAGGCTGATTGGGCTCTTA 918 Query 131823 AATGGATTCA---AGATGATTCCGCTAATTTTTCTACAAGACTTGTAGCTTTTGCTTGTG 131879 |||||||||| | |||| | |||| || ||| | | || |||||||||| Sbjct 919 AATGGATTCATTCAAATGAG------AGTTTTGACACTAGAATGATTGCATTTGCTTGTG 972 Query 131880 TTGAAGGTATATTCTTTTCAGGTGCTTTCTGTGCTATCTTTTGGCTTAAGAAGCGTGGAT 131939 |||||||||||||||||||||| |||| ||| || |||||||| || ||| | || Sbjct 973 TTGAAGGTATATTCTTTTCAGGATCTTTTGCTGCAATATTTTGGCTGAAAAAGAGAGGTA 1032 Query 131940 TGATGCCTGGACTCTCATTGTCCAATCAATTCATCTCGAGAGATGAAGCATTGCATACTG 131999 | | |||| || |||| || ||| || | || || || ||||||| |||||||||| Sbjct 1033 TTCTTCCTGCTCTTACATTTTCTAATGAACTTATTTCAAGGGATGAAGGTTTGCATACTG 1092 Query 132000 AATTTGCT 132007 | |||||| Sbjct 1093 ATTTTGCT 1100 >seq1 Length=15122 Score = 168 bits (186), Expect = 2e-36 Identities = 363/534 (68%), Gaps = 18/534 (3%) Strand=Plus/Minus Query 304954 TGGCAGACCTTTAAAGGGTATTAGGCAACGCATTAAAGGTAAAGAGGGTCGTATTCGAGG 305013 ||| |||||| | ||| |||| || ||||||||||||||||| | ||| |||| Sbjct 11870 TGGAAGACCTCTTAAGTCAATTACTTGTCGAATTAAAGGTAAAGAGGGAAGAATTAGAGG 11811 Query 305014 TAATCTAATGGGAAAACGTGTTGATTTTAGTGCAAGAAGTGTAATCACACCTGATTCTCA 305073 | | | ||||| ||| | ||||||||| |||| | | |||||| || |||||| | | Sbjct 11810 TTGTTTGATGGGTAAAAGAGTTGATTTTTCTGCACGTACTGTAATTACTCCTGATAGTAA 11751 Query 305074 AATTAGTCTTCATGAATTAGGAGTTCCAATTGAAATTGCTTTAAAACTAACATTTCCAGA 305133 ||| ||| || || | ||| |||| ||| | | ||| || |||||||||| || Sbjct 11750 CATTGAACTTGATCAAATTGGATTTCCTATTAAGTTAGCTAAAATTTTAACATTTCCTGA 11691 Query 305134 GAAAGTTA-ACGAGAAAAATATTAAACATTTGAGACGTTGTGTTCTTAATGGAAATAGCA 305192 ||||| | || | || || ||| || | | | || || |||||| | Sbjct 11690 AAAAGTAACACCATTTAATAATCAAAAGTTACAAAAAT-GTATTAATAATGGTCCAACTG 11632 Query 305193 AGTATCCAGGTGCTCGTGCTGTTATAA-AACACAAGCAAAAGAAGACAATATCTTTGAAC 305251 | |||||||||||| | ||| || | |||| | | | | ||||| |||| Sbjct 11631 AATATCCAGGTGCTAATTATGTAATCAGAACAGATGGACA-GAAGA--------TTGATT 11581 Query 305252 CATATCGATTTAAAACAATTCAGTAAAATGCTTGAAATTAATGATATTGTTATCAGACAT 305311 | | || ||| | | | | | |||||||||| ||||||| |||||| Sbjct 11580 TAAA---ATATAATAGGCATGATTTGCA-GCTTGAAATTGGATCTATTGTTGAAAGACAT 11525 Query 305312 TTGAATGACAATGATTGGGTTCTGTTCAATAGGCAACCATCACTGCATAAAATGTCTATG 305371 || | || |||| ||||| |||||||| ||||| ||||| || |||||||||||| Sbjct 11524 TTACAAGATGATGACGTTGTTCTCTTCAATAGACAACCTTCACTTCACAAAATGTCTATG 11465 Query 305372 ATGGCTCATAAAGTCAAAGT-ATTATCTGGATTGACATTTCGATTAAATGTAAGTGCTTG 305430 |||||||| | | | || || |||| | | | || ||| ||||| | ||||| Sbjct 11464 ATGGCTCACAGAATTAAGGTAATTAACAGTA-AAACTTTTACTGTAAATCTTAGTGCAAC 11406 Query 305431 TACGCCTTATAATGCGGATTTTGATGGAGATGAAATGAATATGCATGTACCTCA 305484 ||| ||||||||||| ||||||||||| |||||||||||| | |||||||| || Sbjct 11405 TACTCCTTATAATGCAGATTTTGATGGTGATGAAATGAATGTACATGTACCACA 11352 >seq1043 Length=1839 Score = 167 bits (184), Expect = 6e-36 Identities = 369/548 (67%), Gaps = 13/548 (2%) Strand=Plus/Plus Query 131465 ATGTATAAGAAATCTGTTGCGGCCTTCTGGACTGTTGAAGAGATCGATATGACCAAAGAT 131524 |||||||| || | ||| | | | |||||||||||||| || || | || |||||| Sbjct 1297 ATGTATAAAAAGGCATCTGCTGTCATTTGGACTGTTGAAGAAATTGACTTTACTAAAGAT 1356 Query 131525 ATTGATGATTGGGAAAAATTAACCTTGAATGAAAAAGATTTTGTTTCCAAAGTTCTT-GC 131583 | |||||| |||| |||| | | |||| || | |||| || || | || || Sbjct 1357 GCTAATGATTTTGAAACTTTAAACGAGGATGAGAA-GTTTTTCATTAAAACTGTGTTAGC 1415 Query 131584 ATTCTTCGCCGGAAGTGATGGCATTGTTATTGAAAATCTTGTTATTAA-TTTCATTCAAG 131642 ||||| || | ||||| ||||||| | ||||| || ||| | ||| | | | | Sbjct 1416 TTTCTTTGCAGCCTCAGATGGTATTGTTAATCAAAAT-TTATTAGAACGTTTTACTAATG 1474 Query 131643 AAATTGATATTCCTGAAGTAACATCGTTCTACACATTTCAAGCCGCTGTTGAATCTATTC 131702 ||||| | || ||||| | || || || | || ||| || ||||| | ||| Sbjct 1475 AAATTCACATGTTAGAAGTGAAGTCATTTTATAGTTTACAATGTTCTATTGAAAATGTTC 1534 Query 131703 ATAGCGAGATGTATTCATTATTGATTGAGAGTCTTGTTAAAAATGAAGATGATAAAAATA 131762 ||| |||| || || ||||| || | |||| | || |||| ||| | ||| Sbjct 1535 ATAATGAGACATACTCTAAGTTGATAGAAACTCTTATCAAGGATGATCGTGAGAGGGATA 1594 Query 131763 AATTATTTGATGCTGTAAATAAATTTCCTGCAATTAAAAAGAAAGCAGAATGGGCTATTA 131822 |||||| | | | | | | | |||| | ||||| || || || || |||||| ||| Sbjct 1595 TTTTATTTAACGGTATTGAACATTATCCTTCTATTAAGAAAAAGGCTGATTGGGCTCTTA 1654 Query 131823 AATGGATTCA---AGATGATTCCGCTAATTTTTCTACAAGACTTGTAGCTTTTGCTTGTG 131879 |||||||||| | |||| | |||| ||| ||| | | || |||||||||| Sbjct 1655 AATGGATTCATTCAAATGAG------AGTTTTGATACTAGAATGATTGCATTTGCTTGTG 1708 Query 131880 TTGAAGGTATATTCTTTTCAGGTGCTTTCTGTGCTATCTTTTGGCTTAAGAAGCGTGGAT 131939 |||||||||||||||||||||| |||| ||| || |||||| | || || | || Sbjct 1709 TTGAAGGTATATTCTTTTCAGGATCTTTTGCTGCAATATTTTGGTTGAAAAAAAGAGGTA 1768 Query 131940 TGATGCCTGGACTCTCATTGTCCAATCAATTCATCTCGAGAGATGAAGCATTGCATACTG 131999 | | |||| || |||| || ||| || | || || || ||||||| |||||||||| Sbjct 1769 TTCTTCCTGCTCTTACATTTTCTAATGAACTTATTTCAAGGGATGAAGGTTTGCATACTG 1828 Query 132000 AATTTGCT 132007 | |||||| Sbjct 1829 ATTTTGCT 1836 >seq746 Length=365 Score = 113 bits (124), Expect = 1e-19 Identities = 223/323 (69%), Gaps = 8/323 (2%) Strand=Plus/Plus Query 131955 CATTGTCCAATCAATTCATCTCGAGAGATGAAGCATTGCATACTGAATTTGCTATATTAA 132014 |||| || ||| || | || || || ||||||| ||||||||||| |||||| || Sbjct 23 CATTTTCTAATGAACTTATTTCAAGGGATGAAGGTTTGCATACTGATTTTGCTTGTTTGC 82 Query 132015 TCTATAGAAAATTTGCTGATAAACTTGATGAAAATAATATTAAACAACTTATAAGCGAAG 132074 | | || |||| | || | | || | || |||||| | || | | |||| Sbjct 83 TTCAC-GAGTATTT-CAGAGAGAA---ATCACCGTAC-ATTAAAGATATTGTCCGTGAAG 136 Query 132075 CAGTTGATATCGAGAAGGAGTTTATTACAGAAGCTTTGCCTTGCAATTTGATTGGGATGA 132134 ||||||| || || ||||| ||| || | || ||||| ||| || || |||||||||| Sbjct 137 CAGTTGAAATAGAAAAGGAATTTTTTGCTGAGGCTTTACCTGTAAAATTAATTGGGATGA 196 Query 132135 ATGCTGACTCTATGAAGGAGTACATTGAATTCGTTGCTGATCGTTTAATTAACCAACTTG 132194 ||||| | |||| |||||||||||||| |||||||| | ||| || | | | | Sbjct 197 ATGCTAAACAAATGAGTGAGTACATTGAATTTATTGCTGATAGATTACTTTATGAGTTAG 256 Query 132195 GATATTCCAAGATTTATAACACCCAAAACCCCTATACA-TGGATGGAGTCAATTTCGCTT 132253 | | || || ||||| ||||| | |||||| | | || | ||||| ||||| | Sbjct 257 GTGAGTCTAAAATTTACAACACTCCAAACCCAT-TCCATTTTATGGACAACATTTCATTG 315 Query 132254 GAAGGTAAAACGAACTTCTTCGA 132276 |||||||||| || ||||| || Sbjct 316 CAAGGTAAAACTAATTTCTTTGA 338 >seq22 Length=80051 Score = 107 bits (118), Expect = 5e-18 Identities = 141/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 305293 TGATATTGTTATCAGACATTTGAATGACAATGATTGGGTTCTGTTCAATAGGCAACCATC 305352 |||||| ||| |||||| | |||||||| | |||| |||||||| || || Sbjct 26505 TGATATAGTTGAGAGACATCTTTTGGACAATGACATTTTATTGTTTAATAGGCAGCCTTC 26564 Query 305353 ACTGCATAAAATGTCTATGATGGCTCATAAAGTCAAAGTATTATCTGGATTGA-CATTTC 305411 |||||||| ||| ||| ||||| |||| ||| || | | || | | ||||| Sbjct 26565 ACTGCATAGAATTAGTATAATGGCACATAGAGTTAAGAT-TCATAACAACCAAACATTTA 26623 Query 305412 GATTAAATGTAAGTGCTTGTACGCCTTATAATGCGGATTTTGATGGAGATGAAATGAATA 305471 |||| |||||| ||| |||||| || ||||| || ||||||||||| ||||||||||||| Sbjct 26624 GATTTAATGTATGTGATTGTACTCCCTATAACGCTGATTTTGATGGTGATGAAATGAATA 26683 Query 305472 TGCATGTACCTCA 305484 | || | ||||| Sbjct 26684 TACACTTTCCTCA 26696 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186793032149300