Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hepatospora_20eriocheir_20[genbank_20GCA_5F002087885.1_202017-04-12] 1,300 sequences; 4,570,278 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq1262 118 3e-21 >seq1262 Length=14089 Score = 118 bits (130), Expect = 3e-21 Identities = 169/232 (73%), Gaps = 7/232 (3%) Strand=Plus/Plus Query 206162 CTAAAATGTACCAGATATTTTGCAAA-ACGCTCACAGGAAAAACGATCACTTTGGAAGTG 206220 |||||||| ||||| ||||| ||| || || ||||||||||| || || || ||| | Sbjct 4290 CTAAAATG---CAGAT-TTTTGTAAAGACACTTACAGGAAAAACAATTACATTAGAATTA 4345 Query 206221 GAAAGTTCTGACACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTT 206279 || | || || | || | || ||||| ||| |||||||| |||||||| ||| Sbjct 4346 GATCCAGCAGATACTATTGAGACTGTTAAAGCGAAA-ATTCAAGACAAAGAAGGTATTCC 4404 Query 206280 GCCGGACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGC 206339 || ||| || |||||||| || || ||||| || | ||||||||||| ||| || Sbjct 4405 TCCAGACCAACAGAGACTTATATTTGCGGGAAAACAACTAGAAGATGGAAGAACTCTGAG 4464 Query 206340 CGATTACAACGTCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCGA 206391 ||||||||| | ||||| || |||| | || |||||||| |||||| || Sbjct 4465 TGATTACAACATACAGAAGGAAAGTACTTTGCATCTTGTTTTAAGACTTAGA 4516 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181801115297300