Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hepatospora_20eriocheir_20[genbank_20GCA_5F002087885.1_202017-04-12] 1,300 sequences; 4,570,278 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq1043 149 5e-31 seq130 149 5e-31 seq580 131 1e-25 seq746 89.7 4e-13 >seq1043 Length=1839 Score = 149 bits (164), Expect = 5e-31 Identities = 391/583 (67%), Gaps = 28/583 (5%) Strand=Plus/Plus Query 43712 CCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGC-GTCATTTTGGAC 43770 |||||||||| || || || ||| ||||| ||||| ||| || ||||||| |||| Sbjct 1270 CCAATTCAATTTCCAGAGATTTGGGGGATGTATAAAAAGGCATCTGCTGTCATTT-GGAC 1328 Query 43771 AGCAGAAGAAGTTGATTTGACTAAAGA--CTTAGCACATTGGATTGCATTAAAACCACAA 43828 | |||||| |||| || |||||||| || | | ||| | | ||||| | Sbjct 1329 TGTTGAAGAAATTGACTTTACTAAAGATGCTAATGATTTTGAAA--CTTTAAACGAGGAT 1386 Query 43829 GAAAAACATTTTAT---ATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTC 43885 || || ||| || | || || || || || ||||| || || || || || Sbjct 1387 GAGAAGTTTTTCATTAAAACTGTG---TTAGCTTTCTTTGCAGCCTCAGATGGTATTGTT 1443 Query 43886 AATGAAAATTTGGTTAGT-CGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGT-- 43942 ||| ||||||| |||| || ||| | | ||| |||| | ||||| || || Sbjct 1444 AATCAAAATTTA-TTAGAACGTTTTACTAATGAAATTCACATGTTAGAAGT--GAAGTCA 1500 Query 43943 TTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATA 44002 |||||| | || ||| | | || |||||| ||||| || | ||| | ||||| Sbjct 1501 TTTTATAGTTTACAATGTTCTATTGAAAATGTTCATAATGAGACATACTCTAAGTTGATA 1560 Query 44003 GATACGTACATCAAAGATGGGCACGAGAAGCATCGATTGTTTAATGCGATAGAAACAGTA 44062 || || ||||| |||| | |||| | || || ||||| | || ||| || || Sbjct 1561 GAAACTCTTATCAAGGATGATCGTGAGAGGGATATTTTATTTAACGGTATTGAA-CATTA 1619 Query 44063 -CCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAAATTCAAATGATTCTTT 44121 ||| | ||||| | || || || ||||| ||||||||||| |||||||||| ||| Sbjct 1620 TCCTTCTATTAAGAAAAAGGCTGATTGGGCTCTTAAATGGATTCATTCAAATGAGAGTTT 1679 Query 44122 TG----GAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGT 44177 || |||| || | || ||||| ||| ||||| || |||||||||||||| | Sbjct 1680 TGATACTAGAATGA----TTGCATTTGCTTGTGTTGAAGGTATATTCTTTTCAGGATCTT 1735 Query 44178 TTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATG 44237 |||| || ||||||||||| || ||| ||||| | | |||| | || ||||| |||| Sbjct 1736 TTGCTGCAATATTTTGGTTGAAAAAAAGAGGTATTCTTCCTGCTCTTACATTTTCTAATG 1795 Query 44238 AGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTG 44280 | | || | |||||||| || ||| ||||||||||| Sbjct 1796 AACTTATTTCAAGGGATGAAGGTTTGCATACTGATTTTGCTTG 1838 >seq130 Length=45930 Score = 149 bits (164), Expect = 5e-31 Identities = 300/434 (69%), Gaps = 16/434 (4%) Strand=Plus/Minus Query 19339 CATGTTCGTGGACTTTTGCTTTATGGGCCACCGGGTTGTGGAAAAACATTAATTGCGAGA 19398 |||||| ||| || |||| ||||| ||||| || ||| || || |||||||| ||| Sbjct 26523 CATGTTAAGGGAATTATGCTATATGGTCCACCTGGAACTGGTAAGACGTTAATTGCTAGA 26464 Query 19399 GAACTTAGTAAATTACTTACAAAA-CAAC--CTCCCAAAATTGTAAATGGTCCTGAAATC 19455 || |||| | | |||| || ||| | || |||||||| ||||| |||||||| Sbjct 26463 -AAGTTAGGA--TCACTTCTGAATTCAAGAGCACCTAAAATTGTTAATGGACCTGAAATT 26407 Query 19456 TTAAATAAATATGTAGGTCAATCGGAAGAAAATGTACGACGTTTGTTTGCTGACGCTGAA 19515 |||||||| || || |||||||| ||||||||| || || ||| |||||||| ||||| Sbjct 26406 TTAAATAAGTACGTTGGTCAATCAGAAGAAAATATAAGAAATTTATTTGCTGAGGCTGAG 26347 Query 19516 GAAGAACAAAAACGTTTAGGGCGCAAAAGTTCT---TTGCACATTATAATACTAGATGAA 19572 | || | ||| | |||| | | | || || || || || || | |||||| Sbjct 26346 AATGAGTATAAAA-TGAAGGGTG--ATCGATCGCAATTACATATAATTATTTTTGATGAA 26290 Query 19573 TTGGACGCAATCTGTAAGCAAAGAGGTTCTGGTGTAAATGGAGTACATGACACTGTTGTC 19632 | || || || ||||| | ||||| || | | | |||||| || | || || Sbjct 26289 ATAGATGCTATTTGTAAAAAGAGAGGATCAGATTCCAGTGGAGTCGGGGATAAAGTAGTT 26230 Query 19633 AATCAACTCCT--GTCAAAATTAGACGGTGTTAACCAACTGAATAATATTTTAGTTATTG 19690 ||||| | | || |||||| || |||||| | || ||||||||||| || || | Sbjct 26229 AATCAGTTATTAAGT-AAAATT-GATGGTGTTGATAGTCTTAATAATATTTTGGTGATAG 26172 Query 19691 GCATGACTAATAGACTGGAATTAATAGACAGCGCCTTATTACGACCCGGTCGGTTGGAAA 19750 | ||||| ||||| || || ||||| || || ||||| |||| ||| | || |||| Sbjct 26171 GAATGACAAATAGGCTTGATTTAATTGATGATGCATTATTGAGACCGGGTAGATTTGAAA 26112 Query 19751 TAAAGATCGAAATT 19764 | || | |||||| Sbjct 26111 TTAAATTAGAAATT 26098 >seq580 Length=1103 Score = 131 bits (144), Expect = 1e-25 Identities = 384/578 (66%), Gaps = 28/578 (5%) Strand=Plus/Plus Query 43717 TCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGC-GTCATTTTGGACAGCAG 43775 ||||| || || || ||| ||||| ||||| ||| || ||||||| |||| | | Sbjct 539 TCAATTTCCAGAGATTTGGGTGATGTATAAAAAGGCATCTGCTGTCATTT-GGACTGTTG 597 Query 43776 AAGAAGTTGATTTGACTAAAGA--CTTAGCACATTGGATTGCATTAAAACCACAAGAAAA 43833 ||||| ||||||| |||||||| || | | ||| | | ||||| | || || Sbjct 598 AAGAAATTGATTTTACTAAAGATGCTAATGATTTTGAAA--CTTTAAACGAGGATGAGAA 655 Query 43834 ACATTTTAT---ATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGA 43890 ||| || | || || | || || ||||| || || || || || ||| | Sbjct 656 GTTTTTCATTAAAACTGTGCTA---GCTTTCTTTGCAGCCTCAGATGGTATTGTTAATCA 712 Query 43891 AAATTTGGTTAGT-CGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGT--TTTTA 43947 |||||| |||| || ||| | | ||| |||| | ||||| || || ||||| Sbjct 713 AAATTTA-TTAGAACGTTTTACTAATGAAATTCACATGTTAGAAGT--GAAGTCATTTTA 769 Query 43948 TGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATAC 44007 | | || ||| | | || |||||| ||||| || | ||| | ||||||| || Sbjct 770 TAGTTTACAATGTTCTATTGAAAATGTTCATAATGAGACATACTCTAAGTTGATAGAAAC 829 Query 44008 GTACATCAAAGATGGGCACGAGAAGCATCGATTGTTTAATGCGATAGAAACAGTA-CCTG 44066 ||||| |||| | |||| | || || ||||| | || ||| || || ||| Sbjct 830 TCTTATCAAGGATGATCGTGAGAGGGATATTTTATTTAACGGTATTGAA-CATTATCCTT 888 Query 44067 CGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAAATTCAAATGATTCTTTTG--- 44123 | ||||| | || || || ||||| ||||||||||| |||||||||| ||||| Sbjct 889 CTATTAAGAAAAAGGCTGATTGGGCTCTTAAATGGATTCATTCAAATGAGAGTTTTGACA 948 Query 44124 -GAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCG 44182 |||| || | || ||||| ||| ||||| || |||||||||||||| ||||| Sbjct 949 CTAGAATGA----TTGCATTTGCTTGTGTTGAAGGTATATTCTTTTCAGGATCTTTTGCT 1004 Query 44183 GCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTA 44242 || ||||||||| | || || ||||| | | |||| | || ||||| ||||| | Sbjct 1005 GCAATATTTTGGCTGAAAAAGAGAGGTATTCTTCCTGCTCTTACATTTTCTAATGAACTT 1064 Query 44243 ATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTG 44280 || | |||||||| || ||| ||||||||||| Sbjct 1065 ATTTCAAGGGATGAAGGTTTGCATACTGATTTTGCTTG 1102 >seq746 Length=365 Score = 89.7 bits (98), Expect = 4e-13 Identities = 159/231 (69%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 44327 ATTACAGATATTGTTGTAGAGGCAGTAAAGATAGAACAAGAATTTATGACAACAGCATTA 44386 |||| ||||||||| || ||||| | |||||| | |||||| | | || ||| Sbjct 115 ATTAAAGATATTGTCCGTGAAGCAGTTGAAATAGAAAAGGAATTTTTTGCTGAGGCTTTA 174 Query 44387 CCTGTAAATTTAATAGGAATGAATG---AACTTTTGATGAACCAATATATTGAATACATT 44443 |||||||| ||||| || ||||||| ||| |||| | || ||||||| ||| Sbjct 175 CCTGTAAAATTAATTGGGATGAATGCTAAAC---AAATGAGTGAGTACATTGAATTTATT 231 Query 44444 GCAGATCGTTTACTTTTGGAACTGGGTTGCGATAAACACTATATTGTACAAAACCCGTTT 44503 || ||| | ||||||| || | ||| |||| || | | |||||| || Sbjct 232 GCTGATAGATTACTTTATGAGTTAGGTGAGTCTAAAATTTACAACACTCCAAACCCATTC 291 Query 44504 GATTTTATGGAAAATATTTCGTTGGAAGGCAAAACAAACTTTTTTGAAAAA 44554 |||||||||| || ||||| ||| |||| ||||| || || ||||| ||| Sbjct 292 CATTTTATGGACAACATTTCATTGCAAGGTAAAACTAATTTCTTTGAGAAA 342 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397449702806500