Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hepatospora_20eriocheir_20[genbank_20GCA_5F002087885.1_202017-04-12] 1,300 sequences; 4,570,278 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq1043 145 7e-30 seq580 143 2e-29 seq746 109 5e-19 >seq1043 Length=1839 Score = 145 bits (160), Expect = 7e-30 Identities = 394/589 (67%), Gaps = 23/589 (4%) Strand=Plus/Minus Query 4547 ACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAA 4606 ||| ||||||||| |||||||||||| || || ||| ||||| |||||||| || | Sbjct 1839 ACAAGCAAAATCAGTATGCAAACCTTCATCCCTTGAAATAAGTTCATTAGAAAATGTAAG 1780 Query 4607 TCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAA 4666 | || | | |||||| ||||| | ||||||||| || ||||| || || |||||||| Sbjct 1779 AGCAGGAAGAATACCTCTTTTTTTCAACCAAAATATTGCAGCAAAAGATCCTGAAAAGAA 1720 Query 4667 TATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCTTT 4726 ||| ||||| || ||||| || | | || | | | | || | || | Sbjct 1719 TATACCTTCAACACAAGCAAATGCAATCATTCTAGTATCAA---AACTCTCATTTGAATG 1663 Query 4727 AATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGA-ATTGTGTATATAGCGT 4785 ||||||||| | ||||| | ||| |||||||||| | ||| | ||| | ||| ||| Sbjct 1662 AATCCATTTAAGAGCCCAATCAGCCTTTTTCTTAATAGAAGGATAATGT-TCAATACCGT 1604 Query 4786 TAAATAATTTACTTTTTTCA-AATGGGTCTTGAATATAAGTGTCTATTA--GTAGGCTAT 4842 ||||||| || | ||| || |||| ||| ||| ||||| | ||| ||| Sbjct 1603 TAAATAAAATATCCCTCTCACGATCATCCTTG-ATAAGAGTTTCTATCAACTTAGAGTAT 1545 Query 4843 ACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTG 4902 | ||| ||| | |||||| |||| | || || | ||||| | | ||||| Sbjct 1544 --GTCTCATTATGAACATTTTCAATAGAACATTGTAAACTATAAAATGACTTCACTTCTA 1487 Query 4903 TTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGG 4962 | |||| ||| ||| ||| | ||||| ||| |||| || || ||||| || || Sbjct 1486 ACATGTGAATTTCATTAGTAAAACGTTCTAATAAATTTTGATTAACAATACCATCTGAGG 1427 Query 4963 CTGCAAAAAACGCCAAAACA---TGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTT-- 5017 ||||||| || || || ||| | | | ||| | || || || | | |||||| Sbjct 1426 CTGCAAAGAAAGCTAACACAGTTTTAATGAAAAACTTCTCATCCTC-GTTTAAAGTTTCA 1368 Query 5018 TTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGAC-GCTT 5076 || | | ||||||||| || |||| |||||||||||||| ||| ||| || Sbjct 1367 AAATCATTAG----CATCTTTAGTAAAGTCAATTTCTTCAACAGTCC-AAATGACAGCAG 1313 Query 5077 CCGCTTTTTTGTACATAGACCAAATATCAGGATACTGAATCGGAAGTAT 5125 || ||||| ||||| |||||| || ||| | ||||| || ||||| Sbjct 1312 ATGCCTTTTTATACATCCCCCAAATCTCTGGAAATTGAATTGGCAGTAT 1264 >seq580 Length=1103 Score = 143 bits (158), Expect = 2e-29 Identities = 387/578 (67%), Gaps = 23/578 (4%) Strand=Plus/Minus Query 4547 ACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAA 4606 ||| ||||||||| |||||||||||| || || ||| ||||| |||||||| || | Sbjct 1103 ACAAGCAAAATCAGTATGCAAACCTTCATCCCTTGAAATAAGTTCATTAGAAAATGTAAG 1044 Query 4607 TCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAA 4666 | || | | |||||||||||| ||||||||||| || ||||| || || |||||||| Sbjct 1043 AGCAGGAAGAATACCTCTCTTTTTCAGCCAAAATATTGCAGCAAAAGATCCTGAAAAGAA 984 Query 4667 TATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCTTT 4726 ||| ||||| || ||||| || | | || | | | | || | || | Sbjct 983 TATACCTTCAACACAAGCAAATGCAATCATTCTAGTGTCAA---AACTCTCATTTGAATG 927 Query 4727 AATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGA-ATTGTGTATATAGCGT 4785 ||||||||| | ||||| | ||| |||||||||| | ||| | ||| | ||| ||| Sbjct 926 AATCCATTTAAGAGCCCAATCAGCCTTTTTCTTAATAGAAGGATAATGT-TCAATACCGT 868 Query 4786 TAAATAATTTACTTTTTTCA-AATGGGTCTTGAATATAAGTGTCTATTA--GTAGGCTAT 4842 ||||||| || | ||| || |||| ||| ||| ||||| | ||| ||| Sbjct 867 TAAATAAAATATCCCTCTCACGATCATCCTTG-ATAAGAGTTTCTATCAACTTAGAGTAT 809 Query 4843 ACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTG 4902 | ||| ||| | |||||| |||| | || || | ||||| | | ||||| Sbjct 808 --GTCTCATTATGAACATTTTCAATAGAACATTGTAAACTATAAAATGACTTCACTTCTA 751 Query 4903 TTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGG 4962 | |||| ||| ||| ||| | ||||| ||| |||| || || ||||| || || Sbjct 750 ACATGTGAATTTCATTAGTAAAACGTTCTAATAAATTTTGATTAACAATACCATCTGAGG 691 Query 4963 CTGCAAAAAACGCCAAAACA---TGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTT-- 5017 ||||||| || || | ||| | | | ||| | || || || | | |||||| Sbjct 690 CTGCAAAGAAAGCTAGCACAGTTTTAATGAAAAACTTCTCATCCTC-GTTTAAAGTTTCA 632 Query 5018 TTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGAC-GCTT 5076 || | | ||||||||| ||||||| |||||||||||||| ||| ||| || Sbjct 631 AAATCATTAG----CATCTTTAGTAAAATCAATTTCTTCAACAGTCC-AAATGACAGCAG 577 Query 5077 CCGCTTTTTTGTACATAGACCAAATATCAGGATACTGA 5114 || ||||| ||||| |||||| || ||| | ||| Sbjct 576 ATGCCTTTTTATACATCACCCAAATCTCTGGAAATTGA 539 >seq746 Length=365 Score = 109 bits (120), Expect = 5e-19 Identities = 224/328 (68%), Gaps = 10/328 (3%) Strand=Plus/Minus Query 4278 TTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTTTCCATAAAATCAAACGGATTA 4337 || || |||||||||||||| |||| || ||||| || |||||||||| || || || Sbjct 341 TTCTCAAAGAAATTAGTTTTACCTTGCAATGAAATGTTGTCCATAAAATGGAATGGGTTT 282 Query 4338 GTTGCGTTGT-AATGTTTTTCACACTTTAGAGCTACAAGCAATCGGTCAGCTACAAATTC 4396 | | ||||| ||| || | ||| | | || ||| |||| ||||| | |||||| Sbjct 281 GGAGTGTTGTAAATTTTAGACTCACCTAACTCATA-AAGTAATCTATCAGCAATAAATTC 223 Query 4397 TATATACTGGCTCATGAG-TTCGCAGTTAATTCCAATTAATCTCACAGGTAGCGCGTATG 4455 || |||| ||||| | || ||| || || ||||||||| | ||||||| || | | Sbjct 222 AATGTACTCACTCATTTGTTTAGCA-TTCATCCCAATTAATTTTACAGGTAAAGCCTCAG 164 Query 4456 TCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATTATATCTTTTATTTTATCTTTAG 4515 ||||| || | |||||| || ||||| || |||||||| || | | Sbjct 163 CAAAAAATTCCTTTTCTATTTCAACTGCTTCACGGACAATATCTTTAAT------GTACG 110 Query 4516 ATGGTTTATTTACTAAGTATCCAAACAATAAACACGCAAAATCACAATGCAAACCTTCGT 4575 || ||| | | || || | | ||||| ||||||||| |||||||||||| | Sbjct 109 GTGATTTCTCTCTGAAATACTCGTGAAGCAAACAAGCAAAATCAGTATGCAAACCTTCAT 50 Query 4576 CTCTGCTAATCAGTTCGTTAGAAAACGT 4603 | || ||| ||||| |||||||| || Sbjct 49 CCCTTGAAATAAGTTCATTAGAAAATGT 22 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427042833932900