Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hepatospora_20eriocheir_20[genbank_20GCA_5F002087885.1_202017-04-12] 1,300 sequences; 4,570,278 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq1043 161 1e-34 seq580 161 1e-34 >seq1043 Length=1839 Score = 161 bits (178), Expect = 1e-34 Identities = 357/528 (68%), Gaps = 17/528 (3%) Strand=Plus/Minus Query 23508 ACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAA 23567 ||| ||||||||| ||| | ||||||||||| ||| | ||||||||||||||| | Sbjct 1839 ACAAGCAAAATCAGTATGCAAACCTTCATCCCTTGAAATAAGTTCATTAGAAAATGTAAG 1780 Query 23568 TCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAA 23627 | || | | |||| |||||| | |||||||||||||||||| ||||| |||||||| Sbjct 1779 AGCAGGAAGAATACCTCTTTTTTTCAACCAAAATATTGCAGCAAAAGATCCTGAAAAGAA 1720 Query 23628 AATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGA 23687 ||||| |||||| ||||| || | | | ||| |||| | |||| ||| Sbjct 1719 TATACCTTCAACACAAGCAAATGCAATCATTCTAGTATCAAAACTCTCATTTGAAT---G 1663 Query 23688 AATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCA-ATTGTTTCAATTGCTT 23746 ||||||||| | ||||| |||||| || | | | | | || |||||| | | Sbjct 1662 AATCCATTTAAGAGCCCAATCAGCCTTTTTCTTAATAGAAGGATAATG-TTCAATACCGT 1604 Query 23747 TTAAGAGAAAAGTTTTTTCTTCATTATCTGTTATA----TATGTATCAATTAGTAAACTA 23802 | || | || | | || || ||| | ||| | | |||||| | || | || Sbjct 1603 TAAATAAAATATCCCTCTCACGATCATCCTTGATAAGAGTTTCTATCAACT--TAGAGTA 1546 Query 23803 TACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCA 23862 | | ||| ||||| ||||||||||| | || || | |||||| | | |||| Sbjct 1545 T--GTCTCATTATGAACATTTTCAATAGAACATTGTAAACTATAAAATGACTTCACTTCT 1488 Query 23863 GACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTA 23922 ||| |||| |||||| ||| | || |||||||| |||||||||||||| Sbjct 1487 AACATGTGAATTTCATTAGTAAAACGTTCTAATAAATTTTGATTAACAATACCATCTGAG 1428 Query 23923 GCAGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATC--AGTTGATAATTTTT 23980 || ||||||||||| | ||| ||| || ||| | ||||| ||| ||| ||| Sbjct 1427 GCTGCAAAGAAAGCTAACACAGTTTTAATGAAAAACTTCTCATCCTCGTT--TAAAGTTT 1370 Query 23981 TCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAA 24028 |||||||| |||||| | || |||| ||| ||||| ||||||| Sbjct 1369 CAAAATCATTAGCATCTTTAGTAAAGTCAATTTCTTCAACAGTCCAAA 1322 >seq580 Length=1103 Score = 161 bits (178), Expect = 1e-34 Identities = 357/528 (68%), Gaps = 17/528 (3%) Strand=Plus/Minus Query 23508 ACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAA 23567 ||| ||||||||| ||| | ||||||||||| ||| | ||||||||||||||| | Sbjct 1103 ACAAGCAAAATCAGTATGCAAACCTTCATCCCTTGAAATAAGTTCATTAGAAAATGTAAG 1044 Query 23568 TCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAA 23627 | || | | |||| ||||| | |||||||||||||||||| ||||| |||||||| Sbjct 1043 AGCAGGAAGAATACCTCTCTTTTTCAGCCAAAATATTGCAGCAAAAGATCCTGAAAAGAA 984 Query 23628 AATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGA 23687 ||||| |||||| ||||| || | | | || |||| | |||| ||| Sbjct 983 TATACCTTCAACACAAGCAAATGCAATCATTCTAGTGTCAAAACTCTCATTTGAAT---G 927 Query 23688 AATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCA-ATTGTTTCAATTGCTT 23746 ||||||||| | ||||| |||||| || | | | | | || |||||| | | Sbjct 926 AATCCATTTAAGAGCCCAATCAGCCTTTTTCTTAATAGAAGGATAATG-TTCAATACCGT 868 Query 23747 TTAAGAGAAAAGTTTTTTCTTCATTATCTGTTATA----TATGTATCAATTAGTAAACTA 23802 | || | || | | || || ||| | ||| | | |||||| | || | || Sbjct 867 TAAATAAAATATCCCTCTCACGATCATCCTTGATAAGAGTTTCTATCAACT--TAGAGTA 810 Query 23803 TACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCA 23862 | | ||| ||||| ||||||||||| | || || | |||||| | | |||| Sbjct 809 T--GTCTCATTATGAACATTTTCAATAGAACATTGTAAACTATAAAATGACTTCACTTCT 752 Query 23863 GACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTA 23922 ||| |||| |||||| ||| | || |||||||| |||||||||||||| Sbjct 751 AACATGTGAATTTCATTAGTAAAACGTTCTAATAAATTTTGATTAACAATACCATCTGAG 692 Query 23923 GCAGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATC--AGTTGATAATTTTT 23980 || ||||||||||| || ||| ||| || ||| | ||||| ||| ||| ||| Sbjct 691 GCTGCAAAGAAAGCTAGCACAGTTTTAATGAAAAACTTCTCATCCTCGTT--TAAAGTTT 634 Query 23981 TCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAA 24028 |||||||| |||||| | ||||||| ||| ||||| ||||||| Sbjct 633 CAAAATCATTAGCATCTTTAGTAAAATCAATTTCTTCAACAGTCCAAA 586 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521479525820000