Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mitosporidium_20daphniae_20[genbank_20GCA_5F000760515.1_202014-09-
30] 612 sequences; 5,636,959 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq602 176 5e-39
>seq602
Length=19998
Score = 176 bits (194), Expect = 5e-39
Identities = 419/630 (67%), Gaps = 10/630 (2%)
Strand=Plus/Plus
Query 16198 TAGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGT 16257
|||||| || || ||| |||||| || |||||||| ||||| || ||||||||||||||
Sbjct 6833 TAGACAAGCAAACTCGGTATGTAGACCCTCGTCTCTACTGATCAGCTCGTTGGAAAAAGT 6892
Query 16258 TAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAA 16317
| ||| ||||| || || || |||| ||| || || || ||||| ||||| |||||
Sbjct 6893 AAGCCCAGGCATCAGACCGCGCTTTTTTATCCAAAAGATGGCTGCAAACGACCCGGAAAA 6952
Query 16318 GAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATT 16377
|||||| |||||||| | ||||| || | | || | || | | |||||| |||
Sbjct 6953 GAATATGCCCTCAACTGCGGCAAATGCAACCAGTCTCTGCGAAAAGGGGGCATCTGGATT 7012
Query 16378 ACGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGC 16437
|||||| ||| |||||| |||||||| || || | | || ||| |||||
Sbjct 7013 TGCAATCCAGTTCAAAGCCCATTTGGCTTTTTTTTCAATGCTAGGGATATATTCGATGGC 7072
Query 16438 CTTAAACAATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGTA 16497
|| |||||||| ||||| |||| ||||| || |||||||| | ||
Sbjct 7073 GTTGAACAATTTTAGACGCTCCTGCTCATCGCGAATATATGTGTCAATCAGAAGGGAATA 7132
Query 16498 CATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGC 16557
||| || || || || || || || || || || || || ||| | |||||||| |
Sbjct 7133 CATCTCAGAATGGATATTTTCCATCATGATTTGGAACCCGTAAAAGAAACGAGCCTCTGG 7192
Query 16558 TATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGC 16617
||||| || ||| ||| || | | | || ||||| || || || || ||
Sbjct 7193 GATTTGCACCTCCCTAGCAAAGCGAACAACTAAATTTTCATTTACAATTCCATCGGAGGC 7252
Query 16618 AGCAAAAAACGCCAATATGTGCTTAATGAAAT---ATTTTTCGTCAGATGTAAGAATATG 16674
|||||||| ||||| | ||| || |||| || ||||| | |||
Sbjct 7253 TGCAAAAAAGGCCAAAACGTGAGAGATAAAATGGCGTTCCCCGTCA---TTCAGAGACGC 7309
Query 16675 CCAATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGCCACTGC 16734
||||| ||| ||| || || | ||||| ||||| |||||| ||| ||| || |
Sbjct 7310 CCAATGGGTTAGATCCTTTGACAGGTCCACCTCTTCGACCGTCCAGAAGGAAGCAACCGA 7369
Query 16735 CTTTTTATACATTTTCCAAATATCATTGTATTGTATGGGAAATACGACGTATCTATCTAA 16794
||||||||| | ||| || || | |||| || ||||| | ||| ||| | ||
Sbjct 7370 CTTTTTATAAAAAAGCCAGATTTCCTCATATTTGATTGGAAAAATCACGAATC--TGGAA 7427
Query 16795 GGAT--TCCTTTAACACGGGTTCATCTTCC 16822
|||| || | |||| ||||| || |||
Sbjct 7428 GGATTATCTCTCAACAAAGGTTCCTCCTCC 7457
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511410487679840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |