Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mitosporidium_20daphniae_20[genbank_20GCA_5F000760515.1_202014-09-
30] 612 sequences; 5,636,959 total letters
Query= NC_003083.1
Length=118584
Score E
Sequences producing significant alignments: (Bits) Value
seq49 86.0 5e-12
>seq49
Length=10291
Score = 86.0 bits (94), Expect = 5e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 18096 TATCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCG 18155
|||||||| || ||||| || || | || || ||||| ||||||||||| || |||||
Sbjct 9948 TATCCTCCTCGCAGTCTCAGCACTAGATGGAGGGTTGACTCTTTTTGAATATTATAGTCA 10007
Query 18156 GCCATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACG 18215
| | ||| | | ||| |||| || || || ||| | ||||| | ||| || ||
Sbjct 10008 GAGAGCGTTCTTCCATCCTCCAGCTGCTTTCCAGCAAATATAAGGCGTTGCTGGTCAGGC 10067
Query 18216 GGCACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCG 18275
|| | ||||| || || |||| |||||| || | | ||| ||||| | ||
Sbjct 10068 GGTATTCCTTCTTTGTCTTGGATTTTTTGCTTTACATTTTCAATGGTGTCTGAAGATTCA 10127
Query 18276 GTTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
||| | ||||| |||| || || | |||||| || || ||||||||
Sbjct 10128 ACTTCTAGCGTGATTGTTTTCCCAGTAAGTGTTTTGACGAAGATTTGCAT 10177
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 379341170567940
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |