Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mitosporidium_20daphniae_20[genbank_20GCA_5F000760515.1_202014-09- 30] 612 sequences; 5,636,959 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq49 98.7 1e-15 >seq49 Length=10291 Score = 98.7 bits (108), Expect = 1e-15 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 || |||||||||||||| ||||| || | || || || || ||||| || ||| Sbjct 9981 GTTGACTCTTTTTGAATATTATAGTCAGAGAGCGTTCTTCCATCCTCCAGCTGCTTTCCA 10040 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687 ||| | || || |||||||| || || ||||| ||||||||||| ||||||||| ||| Sbjct 10041 GCAAATATAAGGCGTTGCTGGTCAGGCGGTATTCCTTCTTTGTCTTGGATTTTTTGCTTT 10100 Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747 | | ||| | ||||| | | || || || | || | || || || || | ||| Sbjct 10101 ACATTTTCAATGGTGTCTGAAGATTCAACTTCTAGCGTGATTGTTTTCCCAGTAAGTGTT 10160 Query 139748 TTTACGAATATTTGCAT 139764 || ||||| |||||||| Sbjct 10161 TTGACGAAGATTTGCAT 10177 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496060205110400