Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Mitosporidium_20daphniae_20[genbank_20GCA_5F000760515.1_202014-09-
30] 612 sequences; 5,636,959 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq602 224 1e-53
seq113 156 6e-33
>seq602
Length=19998
Score = 224 bits (248), Expect = 1e-53
Identities = 408/593 (69%), Gaps = 13/593 (2%)
Strand=Plus/Plus
Query 49959 ACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAG 50018
||| || || ||| || ||||||||||||||||| || || ||||||||||| || ||
Sbjct 6836 ACAAGCAAACTCGGTATGTAGACCCTCGTCTCTACTGATCAGCTCGTTGGAAAAAGTAAG 6895
Query 50019 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAA 50078
|| ||||| || || |||||||| | |||||| |||| ||||| ||||| ||||||||
Sbjct 6896 CCCAGGCATCAGACCGCGCTTTTTTATCCAAAAGATGGCTGCAAACGACCCGGAAAAGAA 6955
Query 50079 GATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGC-GCTGTCATGT- 50136
|| || || ||||||||||| ||||| ||||||| | | ||| ||| || |
Sbjct 6956 TATGCCCTCAACTGCGGCAAATGCAACCAGTCTCTGCGAAAAGGGGGCATCTG-GATTTG 7014
Query 50137 --ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCAT 50194
||||| || |||||| | ||| || |||| | | ||| || ||| ||||| |
Sbjct 7015 CAATCCAGTTCAAAGCCCATTTGGCTTTTTTTTCAATGCTAGGGATATATTCGATGGCGT 7074
Query 50195 TAAAGAGATAGtttttttCATTACT----ATCTTTAACATAAGTATCGATCAAAAGACTA 50250
| | | | |||| | | || ||| || ||| || || |||| ||| |
Sbjct 7075 TGA----ACAATTTTAGACGCTCCTGCTCATCGCGAATATATGTGTCAATCAGAAGGGAA 7130
Query 50251 TACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCG 50310
||||| || ||||| || ||||| || || || || ||||| || | | ||||||
Sbjct 7131 TACATCTCAGAATGGATATTTTCCATCATGATTTGGAACCCGTAAAAGAAACGAGCCTCT 7190
Query 50311 GTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTG 50370
| || ||||| || || ||| || || ||||||||||||| || ||||| || |
Sbjct 7191 GGGATTTGCACCTCCCTAGCAAAGCGAACAACTAAATTTTCATTTACAATTCCATCGGAG 7250
Query 50371 GCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGTTTATTC 50430
||||||||||| ||||| || || |||||||| ||| | | || |
Sbjct 7251 GCTGCAAAAAAGGCCAAAACGTGAGAGATAAAATGGCGTTCCCCGTCATTCAGAGACGCC 7310
Query 50431 CAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCC 50490
|||| | | ||| || || | || || ||||| || ||||| || || || | | |
Sbjct 7311 CAATGGGTTAGATCCTTTGACAGGTCCACCTCTTCGACCGTCCAGAAGGAAGCAACCGAC 7370
Query 50491 TTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAATCT 50543
|||||||| | | |||||| || | ||||| |||||| ||||| || |||||
Sbjct 7371 TTTTTATAAAAAAGCCAGATTTCCTCATATTTGATTGGAAAAATCACGAATCT 7423
>seq113
Length=5777
Score = 156 bits (172), Expect = 6e-33
Identities = 1146/1834 (62%), Gaps = 34/1834 (2%)
Strand=Plus/Plus
Query 78718 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 78777
|| |||| ||||| | | ||| || || || || ||||| ||||| || || |||||
Sbjct 3332 GTAAATTTAATGGCTTCAGCTGCAGGCTTTGTTCGCAGATAATACATGCCGGTCTTTAGC 3391
Query 78778 CCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGA-AT--AACTCGGATCTGCT 78834
|| |||| ||| ||||||||| || || || || || || || || ||
Sbjct 3392 CCCTTTTTCCACGAGTAAAAATGCATAGAAGTGAGCTTCGAGATGGAA---GGCTCGGCA 3448
Query 78835 ATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTT 78894
|| || ||||| | ||| || ||||| ||||| ||||| || | ||| | ||||| |
Sbjct 3449 ATGTGAATATTGAGAGACTGGCTTTGGTCGATAAAGGCGCCTCGGTCCACGGCCATATCA 3508
Query 78895 ATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGA 78954
||||| ||||||||||||||||||| | || |||||| || | || ||||| |||
Sbjct 3509 ATGATGCTCTTTTGTGGAATTTCCCACACGGTCCTATAAAGGTGCCTTATGTCTTCAGGA 3568
Query 78955 AGGTTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCTTCA 79011
| | | ||||| ||| || ||| | ||| || ||||| | || ||
Sbjct 3569 ATCTCGGGTATATTCGCAATTGAGCCATTGTTTGCAATGATCCTGGTTCGCATAGACGCA 3628
Query 79012 TTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCT 79071
| ||| || | | | ||| | ||| ||||| |||| | | |||||||||
Sbjct 3629 TCCCACAAACCTAGATTTATCAAATCCTTAAAGAGATATTGATTGAGAATTTGAAATTCG 3688
Query 79072 CCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATTCATTATTT 79131
|| || || |||| | || || ||||| || || | || | |||| ||
Sbjct 3689 CCGGATAACACTCGTCTTGTATATATATTTGACGTGTAGGCCTCAAAGCATTCGTTGAAC 3748
Query 79132 CCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGA 79191
|| || ||||| | || || ||||| ||||| || || | | || || ||||
Sbjct 3749 CCTAATATTTGGGATGTCGAGGCCGTGGGCATCGGAGCTAGGAGCAAGGAGTTCCTAACG 3808
Query 79192 CCGTATGATCTGATTTTATCTTTTAGAGATTCCCAATCCCA--AAGATCAGACGGGACAA 79249
|| || | || | || || ||||||||||| ||||| || || ||||
Sbjct 3809 CCATACTTGGCAACCTTCGCACGAAGGGAATCCCAATCCCATAAAGAT--GATGGCACAA 3866
Query 79250 CATTCCAAAGATCATATTGTAGAATACCGTTACTAGCGTATGATCCTGTGTATGTTTCAT 79309
||||||| | || |||| | || || | | | | ||| ||| | || |
Sbjct 3867 CATTCCACATGTCGAATTGAAAGATGCCCTGAGAAATGGGGCTTCCCTGGTAAGACTCGT 3926
Query 79310 AAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAATAAATGGTTT 79369
| | || | | || | ||||| | ||| | || | | || || || |
Sbjct 3927 ATGTACCAGTTTGCTGAGCCAGCTCACACGACTGCTCAAGAGCAGCATGGTATATTGTCT 3986
Query 79370 CGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGGATAATTTAAGAGAA 79429
| || ||||| | || | ||| | ||| |||| ||||| || || | | |
Sbjct 3987 CAAATATCTTTATGTTCAATTCTCGCGCTGGAGGGCTGTCAAAAGGCATTTTGCATCGTA 4046
Query 79430 TAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAAA 79489
|||| ||||| | ||||| || ||||| || || |||||||||||| |||| ||
Sbjct 4047 AGAACGTATCTGCAAGACCTTGGACGCCAATTCCAATCGGTCTATGTCTCATATTTGATC 4106
Query 79490 TTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTCCTGACTA 79549
||| || | |||||| | || | ||| ||||| ||||| ||||| | ||
Sbjct 4107 GCCTAGCCTCCTCGACAGGATAGAAGTTGACATCGATAATATTATTAAGATTTTTTGTTA 4166
Query 79550 TTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAATCGTCCATCTATT---ACAAACA 79606
|||||| | |||| | ||| | ||||||||| || || || | |||||
Sbjct 4167 CCACTTTGGCAACATAATGTAGCATATCAAAATCAAAAGACCCGTCGCTTTTGATAAACA 4226
Query 79607 TGTTCAACGCGACAGATGCCAGATTACAAACGGCTACCTCAT--TAGCATCCGCATATTG 79664
| | || | || || || |||||||||| ||||||| | || | || ||
Sbjct 4227 TCGGAAGTGCAATGGAAGCGAGGTTACAAACGGAAACCTCATCTTTTGATGAG--TACTG 4284
Query 79665 TATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTT 79724
|| ||||| || || | ||| | || ||||| || | |||| ||||||| |||
Sbjct 4285 GATGATTTCTGTACACAAGTTTGAGCTTTTGATGGTCCCCAGGTTTTTTTGATTAGACTT 4344
Query 79725 TTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTAT 79784
| ||| || | ||| ||| | || ||| | || || || ||||| | || | || |
Sbjct 4345 TGCGTTGCAAGAATCTTTAAAGAGCATGTATGGCGTTCCGGTTTCCACTTGCGCATCAAG 4404
Query 79785 AATCGCTTTCCAGACGACTCGAGCCTTTAT---TATA-GACTTGTATCTCTTTTCTCTTT 79840
||| || | ||||| | | || || | || ||| | || | ||| |
Sbjct 4405 AATGGCATACCAGAGCTTTTGGGCAGGGATCGTTTTACGACCAAGACCTTTGGCCTCATA 4464
Query 79841 CGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATT 79900
| | | |||||| ||| ||||| ||||||| ||| || || ||| |
Sbjct 4465 TGAA----GCATATAACTCTTCAAACTCCGGTCCCCAACAGTCGGACAAACCTGGAGCGT 4520
Query 79901 CGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAG 79960
| | ||||| | | | |||| ||||| | || ||||||||||| || ||||| |
Sbjct 4521 CATTTGGACAGAAAAGAGTCCACATCCCATCTTGCTCCACTCGTTTCATGAACAGATCGG 4580
Query 79961 GAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTT 80020
| ||||| || || ||| ||||| ||| | | ||| || ||||| ||| || |
Sbjct 4581 GTATCCATAGGGCATAAAAAAGATCCCTGCACCGACCCTCGTCTTTTCCAAAATTTTTCT 4640
Query 80021 TAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTC 80080
| | ||| | ||| | | || ||||| ||||| || ||||| || || || | | |
Sbjct 4641 TTAAATCCAAGAAATCGAAAACATCAGCGTGCCAGGGCTCCAAATAAATTGCAAAGGCGC 4700
Query 80081 CCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACA 80140
| |||||||| || || || ||||| | |||| || || | ||||| || | | ||
Sbjct 4701 CAGGTCGTTTATTCCCGCCTTGATCGACATATCGTGCAGTCATGTTATAGACACGAAGCA 4760
Query 80141 TTGGAATAATACCATTGGATGTA-CCATTGGTCCCGGAGATATAGCTTCCACTGGCACGA 80199
| || | ||||| || || ||| ||| || || | ||||| ||| ||| |
Sbjct 4761 TGGGGACTATACCGTTTGA-GTAGCCACCTGTTCCAGCAATATAAGACCCAGAGGCTCTT 4819
Query 80200 ATATTACTAAT-TGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTT 80258
|||||| || ||| ||||| | ||||| || || || ||||| ||| |||
Sbjct 4820 ATATTATGGATATGA-AGACCAACACCCCCGGCAGACTTGCTAATCAATGCACATGTTTT 4878
Query 80259 TAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGA 80318
| || ||||| || || || ||| ||| |||| || | ||||||| ||
Sbjct 4879 CAGGGTGTCATATATTCCGGTGATCGAATCGTCAGTCATTGCAATCAAAAAACAGGATGA 4938
Query 80319 CATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTT 80378
| ||| | || || || |||||||| | ||| || || || || || |||
Sbjct 4939 AAGCTGGGGCCGCGGTGTACCGGCATTAAAAAGGGTTGGGGAGGCATGGGTGAACATCCG 4998
Query 80379 TTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATC-CCATTGATGAATTCCTA 80437
| ||||| | ||| ||||| || || || || || | || || | ||||| || |
Sbjct 4999 CTGAGACATCAAATTATACGTTTCGATGGCAGAGTCGACGTCTTCACCG-TGAATGCCAA 5057
Query 80438 CCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACA 80497
||| || | ||| | || | ||| || | || || | |||| | ||| ||| ||
Sbjct 5058 GCGCAACTCTCATGATCAGATACTGGGGACGCTCCACAACCTTGCCCCTGATTCTCAGCA 5117
Query 80498 AGTAAGATTTTTCCAAAGTTTTAAAACCAAAATA 80531
|| || || | |||||||| ||||||||
Sbjct 5118 GATACGAACGCTCAAGGGTTTTAAATCCAAAATA 5151
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718263305243680
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