Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mitosporidium_20daphniae_20[genbank_20GCA_5F000760515.1_202014-09- 30] 612 sequences; 5,636,959 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq602 196 7e-45 >seq602 Length=19998 Score = 196 bits (216), Expect = 7e-45 Identities = 395/571 (69%), Gaps = 19/571 (3%) Strand=Plus/Minus Query 124998 TTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGG 125057 ||||| |||| ||| | || || ||| | || |||||| | || ||||| ||| Sbjct 7411 TTTCCAATCAAATATGAGGAAATCTGGCTTTTTTATAAAAAGTCGGTTGCTTCCTTCTGG 7352 Query 125058 ACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAA 125117 |||||||||||||| || ||||| ||||| || | |||||| | ||| ||| ||| Sbjct 7351 ACGGTCGAAGAGGTGGACCTGTCAAAGGATCTAACCCATTGGGCGTCTC---TGAATGAC 7295 Query 125118 ACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTC 125177 || || | ||||| || ||| |||||||||| ||||| | |||||||||||| || Sbjct 7294 GGGGAACGCCATTTTATCTCTCACGTTTTGGCCTTTTTTGCAGCCTCCGATGGAATTGTA 7235 Query 125178 AACGACAATCT-GTTGACACGATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTG-CT 125235 || || ||| | |||| || || || ||| || || ||||||| |||| || Sbjct 7234 AATGAAAATTTAGTTGTT-CGCTTTGCTAGGGAGGTGCAAATCCCAGAGGC-TCGTTTCT 7177 Query 125236 TTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTG 125295 ||||||| |||||||||||||| || || | || || || ||||| || ||||||| Sbjct 7176 TTTACGGGTTCCAAATCATGATGGAAAATATCCATTCTGAGATGTATTCCCTTCTGATTG 7117 Query 125296 ACATGTACATTCGCGAT---CCGCAACGTAAACACATGCTCTTTAACGCAATCGACACGG 125352 ||| || ||||||||| | | | ||| | | || | || ||||| ||||| Sbjct 7116 ACACATATATTCGCGATGAGCAGGAGCGTCTA-AAAT--TGTTCAACGCCATCGAATATA 7060 Query 125353 TGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCG-ATGACGACAAGTCT 125411 | || || ||||| || |||||| | ||||| | | | | | | | Sbjct 7059 TCCCTAGCATTGAAAAAAAAGCCAAATGGGCTTTGAACTGGATTGCAAATCCAGATGCCC 7000 Query 125412 TC-GTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTT-CGGGTA 125469 | | ||| | |||||||| ||||| ||||| || |||||||| ||||||| ||||| Sbjct 6999 CCTTTTCGC--AGAGACTGGTTGCATTTGCCGCAGTTGAGGGCATATTCTTTTCCGGGTC 6942 Query 125470 GTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTA 125529 | ||||| |||||||||||| | || |||||||| || ||||| || || || | Sbjct 6941 G-TTTGCAGCCATCTTTTGGATAAAAAAGCGCGGTCTGATGCCTGGGCTTACTTTTTCCA 6883 Query 125530 ACGAGTTTATATCTCGAGACGAGGGCCTACA 125560 ||||| | || | |||||||||| ||||| Sbjct 6882 ACGAGCTGATCAGTAGAGACGAGGGTCTACA 6852 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741053530897120